Gene Ava_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3375 
Symbol 
ID3680075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4197856 
End bp4198902 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content43% 
IMG OID637718725 
Productpolysaccharide pyruvyl transferase 
Protein accessionYP_323877 
Protein GI75909581 
COG category[S] Function unknown 
COG ID[COG2327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03609] polysaccharide pyruvyl transferase CsaB 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCAT TATTATCTGG GTATTACGGT AAGGGAAATG GTGGTGACGA AGCTTTATTG 
GCAACGCTTC TGCAAATGTT ACCATCTCAT GTTACGCCTG TGGTGCTGTC TGGAAATCCA
GAAGAAACTA GCGATCGCTA TGGTGTAGAA TCTCACAATC GGATGTCTCT AACATCTGTG
TTGCCAGCTT TACGTTCTTG TGATGCTTTT ATTTGGGGTG GCGGGAGTCT AATTCAGGAT
GTCACCAGCA GTATCAGTCC TTTTTACTAT GGGGGACTGA TGGCGTTAGC GCAGAAAATG
GGTTTAAAGA CTGTAGCTTG GGCGCAAGGG ATTGGCCCCC TAGTGCGTCC CCAGACTCGC
TGGTTAGCAC AACATAATTT TTCTGGTTGC ACAACAGTTA GTGTACGCGA TCGCGTGAGT
GCTGCATTAT TAGCTGATTG GCAGATTCCT TATATACTTG CACCAGACCC AGTTTGGGCG
TTACAGGCAA AACCATTCCC AGAACTTGCC AATTTACCTA CCCCTAGAAT TGCCGTCACC
TTAAGAAACC ATCCCCAATT AACAGCGCCA CGGTTAGCTA ACTTAACTCA AGCCTTGGTG
AGTCTGCAAA AATCTACCCA AGCTTTTATT TTATTACTGC CATTTCAAAA AAGCGAAGAT
TTAGCGATCG CTCAAGCAAT ACAACCTCAA TTAAAAGATG TTAGCGAAAT TGTGTGTATA
GAAGACCCAC AGATTTTAAA AGGTGTATTT CGTGGTGTTG AAATGGCGAT CGGTATGAGG
CTACACAGTC TAATTATGGC AGCAAGTGAA GGTTGTCGCT GTTTTGCCTT GAGTTATGAC
CCCAAAATCA ATCGTTTAAT GGAAGATTTG GCAATACCTG GATGGGATTT AGCCAATCTA
CCAGATAACG CCAATGTCAT TAGTAAAACA TGGATAGATT TCTACACTAA CGCTCAACCT
TTAGCATCTG AGAAAATCAC AACCCTAGTA GAAGGTGCTT TTATGCACAG AGAATTATTG
AGGAAAGCAC TAGGGCGCAT CAATTAG
 
Protein sequence
MRALLSGYYG KGNGGDEALL ATLLQMLPSH VTPVVLSGNP EETSDRYGVE SHNRMSLTSV 
LPALRSCDAF IWGGGSLIQD VTSSISPFYY GGLMALAQKM GLKTVAWAQG IGPLVRPQTR
WLAQHNFSGC TTVSVRDRVS AALLADWQIP YILAPDPVWA LQAKPFPELA NLPTPRIAVT
LRNHPQLTAP RLANLTQALV SLQKSTQAFI LLLPFQKSED LAIAQAIQPQ LKDVSEIVCI
EDPQILKGVF RGVEMAIGMR LHSLIMAASE GCRCFALSYD PKINRLMEDL AIPGWDLANL
PDNANVISKT WIDFYTNAQP LASEKITTLV EGAFMHRELL RKALGRIN