Gene Ava_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3339 
Symbol 
ID3680215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4157591 
End bp4158352 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content44% 
IMG OID637718689 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_323841 
Protein GI75909545 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0689517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTGA ATCAACCTGA ATATTTCACT AAATACGAGA ACTTGCATTT CCATCGAGAT 
GAAAATGGCA TTCTAGAAGT GAGAATGCAC ACAAACAATG GTTCACTCGT TTTCACCGGT
AAAACTCATC GAGAGTTTCC CGACGCATTT TATGACATTA GCCGAGACAG AGATAACCGT
GTTGTCATCC TCACAGGTAC TGGTGATGCT TGGATGGCTG AAATCGATTT TGCTAGTTTA
GGAGATGTCA CCAATCCTCG TGAGTGGGAT AAAACTTATT GGGAAGGTAA AAAGGTGCTG
CAAAACCTCT TGGATATTGA AGTACCAGTC ATCTCTGCTG TCAATGGTGC AGCATTACTT
CATAGTGAAT ACATTCTGAC GACCGACATT ATTCTTGCAT CTGAAAACGC CGTATTTCAA
GATATGCCTC ATTTCAATGC AGGTATCGTA CCAGGTGACG GAGTGCATAT ACTATGGCCA
TTAGCACTTG GTCTTTATCG CGGGCGCTAC TTCTTGCTTA CTCAAGAAAA GCTGACGGCT
CAACAAGCTT ATGAATTAAA TGTTGTCCAT GAAGTATTAC CACAAAGCAA ACTCATGGAA
CGGGCTTGGG AAATTGCCAG GACACTGGCC AAACAGCCCA CATTAAACTT GCGATACACC
CGTGTGGCCT TGACCCAAAG GCTGAAGCGG TTGGTTAATG AAGGAATTGG CTATGGTCTG
GCATTAGAAG GTATTACCGC CACCGATCTC CGCAATACTT GA
 
Protein sequence
MTLNQPEYFT KYENLHFHRD ENGILEVRMH TNNGSLVFTG KTHREFPDAF YDISRDRDNR 
VVILTGTGDA WMAEIDFASL GDVTNPREWD KTYWEGKKVL QNLLDIEVPV ISAVNGAALL
HSEYILTTDI ILASENAVFQ DMPHFNAGIV PGDGVHILWP LALGLYRGRY FLLTQEKLTA
QQAYELNVVH EVLPQSKLME RAWEIARTLA KQPTLNLRYT RVALTQRLKR LVNEGIGYGL
ALEGITATDL RNT