Gene Ava_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3299 
Symbol 
ID3680291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4116303 
End bp4118477 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content44% 
IMG OID637718650 
Producthypothetical protein 
Protein accessionYP_323802 
Protein GI75909506 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.407297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAC ATACTGAATC GGCTTTGGAG GCTGGTTTAG CGGCCCTCAA GCAGGGAAAT 
TATCAAACAG CGATCGCTCA ACTAGAACCC ATCGCCACCC AGGGGAATGG AACGGCTAGC
CTGCAAGCTA GAGTGGGTTT AGTCATGGCC TATGCACGCA GTGGCGAACT CAAGAAAGCG
ATCGCCCTGT GTCAAACTCT AACCGAAAGC CAAAATACCC AGGTGAAAGA ATGGGCTAAT
GTTGCCCTGA CACACCTGAC AAAAAAACGC AAAAAGCCGC AAAATCCTGA TCATGCAGCC
GCAGATACAT CTCCAGCCGC AACTACCAAG CCTCACTACT CATCATCTGT GCCATCTGTA
GGCTTGCAAA ATAGATATGT AGGTAACAAC GGCTTATTAA ACTCTCCAGG CTATACCCAA
CCCAAAGAAT TTGGGATTTA TTGGCGACAA GCAAAACGCG CCAAAGTCTG GCAACCTTTA
AAAAAGCCCA GTTTAATACC TTTGCGGTTG CTGTCAGTAG GAACATTCAT TGCCCTGTTT
TGGGTGCTGA AAGAAATCCT CAAGTCCGTT ATGGCAGCCA TTAACATCAC CTTAGTGAAA
CTGCCTTACG TAGAACCATT ACAGCTGTTA TATCGAGATC CTAGCAGATT GATATTAGCC
ATTTTGTTCA TAGCGATCGC TGCATCCCCT TGGTTGCTAG ATTGGCTACT GGCTTATTTT
TATGGACAAA AAGAGTTATC TAAAGACCTA TTGCCTAATT ACAGTCGGGA AACCTCCCGT
GTTCTACATC GCTACTGCCA ACAGCGACAT TGGCCGTCAC CCCAACTACG AATTTTACCC
ATAGCTGCAC CCATAGCATT AACCTATGGA AACCTACCCA GAAACGCCAG AATCGTTGTT
AGTCAGGGGT TATTAGAACA ACTGGCAGAT GATGAAATTG CTGCTATTTA TGCCGCACAA
CTAGGACAGA TCACTCACCA AGATTTTGTC CTGATGTCAT TGCTATTGTT GATCACCCTA
CCAATTTATC AATTGTATCA GCAAGTTGCT GTATGGGCAG ACAAATTATC CAAAGGCGCA
TTTCATTGGC CGTTGACCAT TACTTCTAGT TTGCTTTATG GGTTGTGGTG TGTGTTGACT
GGTACGGGGT TGCTTTACTC ACGACTGAGA CCTTACCATA GCGATCGCCT AGCGGCAGAA
GTTACAGGTA ATCCCAATGG CTTGACTCGC GCCTTGCTGA AAATTAGCAT CGGCATTGCC
AATGATGTAA AAAGAGAAGA ACAAACCAGT GGTTTATTAG AAAGCTTAAA CCTCCTGCTA
CCAGTCAGCT ATCAACAAAG CATTTCTTTA GGGAGTATTG CTGGTCATTT GAACTTTGAA
TCTTTGTTGA TGTGGGATAG TATCAACCCC TATCGTCGTT GGTTAACAGT TAATAATACC
CATCCTTTAA TAGGCGATCG CATCCGTAAC CTCTGTCAAA TAGCCCAGCA TTGGCATATA
GATCCAGAAG TTCATATAAC TAGCCAACAA TCACTCAGTG AACAGACATT ACAAGTCACC
CATCAATCAT TCTTACGGCA AACTGCTCCT TTTTTAGGAG TTCCTCTAGG TTTTGTCTTT
GCCGGATTGA TTTGGCTAGT TTGGCAAACT GCCTTTGCCC TCAAGTTTTT AAATTTAAAG
TGGATTTATG AAGATTTATC TTTCGTGACA GGTTGCCTAC TCATCGGCTT CAGCATTGGT
ACAGTCATCA GGATGAACTC CTTTTTTCCC AACATTAAGC AAAGCAACAT CCACACAGAT
CAACAACTAC CCCACCTGTT AGCAAATCCC TCTAGCCTAC CCATAGATAG CGTTCCCGTG
CAGTTTGTCG GCAAGTTATT AGGTCGCCAA GGCATGAGTA ACTTTCTATC CCAAGACTTA
ATTCTCCAAT CCAGCACAGG CTTAGTGAAA TTACATCATG TTTCTTGGCT AGGACAACCA
ATTAATCCCC AGGATTTGGT TGGTCGGCAA ATTATTGTTA CAGGTTGGTT TCGCCGAGGT
GCTACACCCT GGATAGACAT CCAAACCATC CAAACCCAAA GTGGCAAAAC TATTAATAGT
CCCCACCCCA TCTGGTCTAT TATCTTGGCA GTCGCAGCCC AAGCTTGGGG AGCCTATATT
TTCCTTGTAG GTTAG
 
Protein sequence
MPSHTESALE AGLAALKQGN YQTAIAQLEP IATQGNGTAS LQARVGLVMA YARSGELKKA 
IALCQTLTES QNTQVKEWAN VALTHLTKKR KKPQNPDHAA ADTSPAATTK PHYSSSVPSV
GLQNRYVGNN GLLNSPGYTQ PKEFGIYWRQ AKRAKVWQPL KKPSLIPLRL LSVGTFIALF
WVLKEILKSV MAAINITLVK LPYVEPLQLL YRDPSRLILA ILFIAIAASP WLLDWLLAYF
YGQKELSKDL LPNYSRETSR VLHRYCQQRH WPSPQLRILP IAAPIALTYG NLPRNARIVV
SQGLLEQLAD DEIAAIYAAQ LGQITHQDFV LMSLLLLITL PIYQLYQQVA VWADKLSKGA
FHWPLTITSS LLYGLWCVLT GTGLLYSRLR PYHSDRLAAE VTGNPNGLTR ALLKISIGIA
NDVKREEQTS GLLESLNLLL PVSYQQSISL GSIAGHLNFE SLLMWDSINP YRRWLTVNNT
HPLIGDRIRN LCQIAQHWHI DPEVHITSQQ SLSEQTLQVT HQSFLRQTAP FLGVPLGFVF
AGLIWLVWQT AFALKFLNLK WIYEDLSFVT GCLLIGFSIG TVIRMNSFFP NIKQSNIHTD
QQLPHLLANP SSLPIDSVPV QFVGKLLGRQ GMSNFLSQDL ILQSSTGLVK LHHVSWLGQP
INPQDLVGRQ IIVTGWFRRG ATPWIDIQTI QTQSGKTINS PHPIWSIILA VAAQAWGAYI
FLVG