| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3294 |
|---|
| Symbol | |
|---|
| ID | 3680286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 4108402 |
|---|
| End bp | 4110444 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637718645 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_323797 |
|---|
| Protein GI | 75909501 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA AAGTCAGATT AGGTTCGCGG AATGTTGCCA TTGTCGGCCC TTATTTAAGT
GGAAAAACAA CTTTACTAGA AAGCTTATTA TTTGTCACAG GAGCGATTTC TCGCAAAGGC
AGCGTTAAGG ATAGTAACAC AGTTGGGGAT AGTGCGAGTG AATCACATGA TCGCCACATG
AGCGTAGAAA TCAGCACCGC CTGCGCTGAG TATAACGACA TTCGTTTTAC TTTTATAGAC
TGTCCGGGTA GCGTTGAATT TACCCAAGAA ACATATAACG CTTTAATGGG TGTTGATGCG
GCAATTGTAG TCTGCGAACC AATACGTGAA AGAGTCCTCA CCCTTGCTCC TCTATTTAAA
TTCCTAGACG ATTGGGAAAT TCCCCATCTT GTCTTTGTGA ATAAAATGGA TCGAGCAAAC
ATTCATGTCC TCGAAACATT ACACGCCCTC AAAGCAGTTT CCAGTCGTCC CTTAGTAGCG
CACCAATACC CCATCATGGC AGGGGAACAA CTCACCGGCT TTATCGACAT GGTGAGTGAA
CAAGCCTATC AATATCATCC CGGCGCACCA GCTGACCCCA TTCCCTTCCC TGAACATCTC
AAACAAGAAG AACATACCGC ACGGGCAGAA ATGCTCGAAG CCCTAGCAAA TTTTGATGAC
CACTTATTGG AAGAACTTTT AGAAGATATT GAACCACCCC AAGAAGAAAT CCTCAAAGAT
TTAAAAATGG AATTAGGGGC TGATTTAGTA GTCCCCGTCT TCTTTGGTGT CGCTGAACAA
GATTATGGTG TCAGACCTTT ATTAGAAGCT TTACTCAGGG AAGCCCCCGA ACCAGAAACC
ACCGCCGCCC GTCGCCTCAA AGGTAAAGCT AGTAATACAC CCATAGCCCA AGTCTTAAAA
ACCTATTACA CACCCCAAGG TGGCAAACTC TCCCTCGTGC GGGTTTGGCA AGGCAAATTA
ACCGATGGTA TCGTCCTCAA CGGCGTGCGC GCTGGGGGAA TTTATCACCT CATGGGACAA
CAACAGCAGT CGGTGAACGA AGTCGGTGCA GGTGAAATTG TTGCCCTCAG TCGTTTAGAA
GGAATTAAAA CCGGGGATAC CATCTCCACA GAACAGTCAA TAGAATTACC CAAAGCCCAA
CAATTAGAGC CAGTTTACGC CCTCGCCATC ACCCCAGAAA AGCGCAACGA TGAAGTAAAA
CTCAGTAGTG CTATCAGCAA ACTCTTAGAA GAAGACCCCT CTCTAGCTTG GGAACAACAC
GGTGACACCC ATGAAGTGAT TTTGTGGGGA CAAGGCGAGA TTCATTTGCA AGTCGCCCTG
GATAGACTGC GCCGCAAATA TAACTTGCCC ATGTCTACCC ACCTGCCACA AGTACCTTAT
AAAGAAACCA TCCGTAAACC AGTTACCTCA GTACATGGAC GCTACAAACA TCAAAGCGGT
GGTCATGGAC AGTTCGGTGA TGTGTTCTTG GATATCAAAC CCCTACCACG GGGTGAAGGC
TTCAACTTCA AGGAAAGCAT TGTTGGCGGT GTAGTGCCTA GACAGTATAT TCCTGGGGTA
GAAATGGGTG TGCGGGAATT CCTTGTACAC GGGCCTTTGG GCTTCCCTGT GGTGGATGTA
GCGGTGACAT TAACAAATGG TTCCTATCAC ACCGTTGATA GTTCCGAACA AGCCTTCAAG
CAAGCCGCCC GTTTAGCTAT GCAAACAGGC ATACCCCAAG CCCAACCCAC CTTATTAGAG
CCGATTCTGC GGGTAGAAGT GACCACACCA AGCGAATTTA CCTCTAAGGT ACTGCAATTG
TTGAGTGGTA GACGGGGGCA AATCTTGGGC TACGAAGGCA GACAAGATTG GCAAGGTTGG
GATAATATTT CTGCTTACCT ACCACAAGCC GAGATGCAGA ACTTTATTGT AGAACTGCGA
TCGCTCACCC TCGGCGTTGG TTATTTCCAT TGGGCTTATG ACCACCTACA AGAAGTCCCA
GAAAAGCTTG CTGAACGCGT ACTTGCTAGT AACGGTAATG GTAGTAACGG CAATGGCAAG
TAG
|
|---|
| Protein sequence | MSEKVRLGSR NVAIVGPYLS GKTTLLESLL FVTGAISRKG SVKDSNTVGD SASESHDRHM
SVEISTACAE YNDIRFTFID CPGSVEFTQE TYNALMGVDA AIVVCEPIRE RVLTLAPLFK
FLDDWEIPHL VFVNKMDRAN IHVLETLHAL KAVSSRPLVA HQYPIMAGEQ LTGFIDMVSE
QAYQYHPGAP ADPIPFPEHL KQEEHTARAE MLEALANFDD HLLEELLEDI EPPQEEILKD
LKMELGADLV VPVFFGVAEQ DYGVRPLLEA LLREAPEPET TAARRLKGKA SNTPIAQVLK
TYYTPQGGKL SLVRVWQGKL TDGIVLNGVR AGGIYHLMGQ QQQSVNEVGA GEIVALSRLE
GIKTGDTIST EQSIELPKAQ QLEPVYALAI TPEKRNDEVK LSSAISKLLE EDPSLAWEQH
GDTHEVILWG QGEIHLQVAL DRLRRKYNLP MSTHLPQVPY KETIRKPVTS VHGRYKHQSG
GHGQFGDVFL DIKPLPRGEG FNFKESIVGG VVPRQYIPGV EMGVREFLVH GPLGFPVVDV
AVTLTNGSYH TVDSSEQAFK QAARLAMQTG IPQAQPTLLE PILRVEVTTP SEFTSKVLQL
LSGRRGQILG YEGRQDWQGW DNISAYLPQA EMQNFIVELR SLTLGVGYFH WAYDHLQEVP
EKLAERVLAS NGNGSNGNGK
|
|---|
| |