Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3234 |
Symbol | |
ID | 3680577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4022414 |
End bp | 4023301 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637718584 |
Product | diguanylate cyclase |
Protein accession | YP_323737 |
Protein GI | 75909441 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTAA TTGAAATATT AGAGGCTAAA CCTAAATCAT TTTCAACTTT ATTAAGTATA TTTACGGTTA GTCTCATAGG GTTAATTAAC TACTGTATTT CTCCTGAAAT TTCTGTATCA ATCTTATATT TACTTCCCAT TGGCATTGCT GCATGGTTTG TCAACAAACA TACAGGATTT TTCGTAGCAG TAAGCAGTGA TATTACTAAT CTTGTTGTTA ATCAAATTCA AGATCAATAT CATTTGCATC CTTTAATTCA TTTTTGGAAT GCACTCGTAA TTTTAAGTTT TTTTCTGTTT GTTAGTCATC TGCTTTCACA ACTAAAAACT ACATTAATCA ACTTAGAGAA ATTAGCACGT ACAGATAATC TCACTGGGTT GACCAATAGA GGATTTTTTT TAGATATAGT CAATAGCGAG ATTGAAAAAT CTTTGAGGCA CCGCGAACCT CTCACACTAG CTTATGTTGA TGTTGATAAT TTTAAACAAA TTAACGATCA GTTTGGTCAT GGTTTTGGCG ATCGCCTGCT GCAAATAATA GCAAAAAGCA CTACTAACAC TCTACGTAAA ATAGATGTAA TTGCTAGACT TGGTGGTGAT GAATTTGCTA TTTTATTACC GCGTACAAGT TATGAATCAG CAGAAGTAGT ACTTCACCGA TTGCATACAG TTCTTCTAGC TTCAATGAAG AAGGAAAATT TATCGGTAAC TTTTAGTATT GGTGCTATTA CTTTTAATAA TCCGCCAAAA TCAGTAGCGG AAATTATCGA AATTGCTGAT AATTTAATGT ATTTGGCTAA AAAGAAAGGT AAAAATTTAT TGCAGCATGA ATTGTGTGAT TGGAAAGTGG AGAGTGAAGA TTGGAAAGTG GTGAATAGTA AGTTTTGA
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Protein sequence | MRLIEILEAK PKSFSTLLSI FTVSLIGLIN YCISPEISVS ILYLLPIGIA AWFVNKHTGF FVAVSSDITN LVVNQIQDQY HLHPLIHFWN ALVILSFFLF VSHLLSQLKT TLINLEKLAR TDNLTGLTNR GFFLDIVNSE IEKSLRHREP LTLAYVDVDN FKQINDQFGH GFGDRLLQII AKSTTNTLRK IDVIARLGGD EFAILLPRTS YESAEVVLHR LHTVLLASMK KENLSVTFSI GAITFNNPPK SVAEIIEIAD NLMYLAKKKG KNLLQHELCD WKVESEDWKV VNSKF
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