Gene Ava_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3174 
Symbol 
ID3680730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3942033 
End bp3942485 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content41% 
IMG OID637718523 
Producthypothetical protein 
Protein accessionYP_323677 
Protein GI75909381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0919885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATG TCTCCAACCC TCAATTGCTT TTGAAGCGCG TTGTTAATGT AAAAGTTATT 
GTCACCCCCC TCTGGAAAGA GGAAGTGCAA CAGCAATTGC AAGCACAAAT TAACCAAATT
GACCAGCAAC TACAACAATT GGATTTAGAA GGACAAAGAG CGATCGCTGC TATTCAAAAG
CAAAGCCTCC AACCACCCGG ACCCCAAACC CTGCAACAAA TTGACAATAT TCAACTCCAA
GTCAATCAAA AGAAAAGCGA ACTTCTAGAA CAAAAAAATC AAATGCTGCA AAATCTCCAG
CAAGTACAAT TGCTTGAGTT AGATCAAGAA GTCAATCAAT TTCAAATGGA AGGTTTCTTC
CGTGTGGAAC GGGGAGACAA CTTGATTAGC AAAATGCAGG TAGAAATCGT CATCCGCGAT
GGTGTTGTAG AAGATATTCG TGGCGACATT TAA
 
Protein sequence
MTDVSNPQLL LKRVVNVKVI VTPLWKEEVQ QQLQAQINQI DQQLQQLDLE GQRAIAAIQK 
QSLQPPGPQT LQQIDNIQLQ VNQKKSELLE QKNQMLQNLQ QVQLLELDQE VNQFQMEGFF
RVERGDNLIS KMQVEIVIRD GVVEDIRGDI