Gene Ava_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3113 
Symbol 
ID3680859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3868127 
End bp3869062 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content39% 
IMG OID637718457 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_323616 
Protein GI75909320 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.658078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATT GGTGGCAAGA AACTTTCCCC AAGGGGCGGC AAAGTCTGAT AATTAGTGAT 
GTTCATGGGT ATCCTGTACA AATTGCATAC GGTGAAAAAG GTACAGGTAG ACCATTATTT
CTAATACACG GTATGGGTAG TTGGAGCTAT AATTGGCGTT ATAGTGTAGG TCCATTATCT
AAGTTTTTTC GAGTCATTTG TGTAGATGCT AAAGGCTTCG GTTTTTCTGA TAAACCTTGT
TTGCGTCAAG AAAAGAATGG GCATCAAGTC ATTGAATTAG AACGCATTAT TCAATGTTTA
TGTGATGAAC CAGCTATTGT TGTGGCTGAA TCCTTAGGTG CATTAGTTGC CCTGGCCTTG
GCACAAAGAA ATGCCGAATT AATCGGGCGG TTAGTAGTAA TTAATGCACC AATTTTTACC
GAAAGTCTGC CCCATTGGGC AATGTCCATA CTCGCCCAAA CACCAATAGA AATATTACAA
ACAATCGATG ATTTGCGTTT AGCTTATTTA TTTGCGCCAA TAGTTCGAGA AGTTATGGCG
ATAGAAAGGC GGAAGGTGCT GTTTGATCCG TCAATTTTGA CTCAAGAAGA TGTTTATTGG
ATTACTTACC CATTTATTGA AATTCCCGGT ACTTTAGTGA AGGTTGCCGA AGAGTTACAA
ATAGCGGCAA GAGAAATCGA GAATTGGCAA GCAAATAAAC CGAATATGCT CAGTGAAATT
CAAAATAAGT TAAATACAAT TGAGGCTCCC ACATTAATTT TATGGGGCGA TAAAGATAGC
TGGTTTCCTG CCAGTCACGG GAAAAAATTG CATCAACATT TGCCTAATTC CAAGTTGCAA
ATTTTGGATA ACTGCTATCA TGACGCTTCC ACTGGTTCCG CAAAAGTGGT CAACAAAGAA
ATTTTGCAAT TTCTCAAGGA GACAGATTTT TTGTAA
 
Protein sequence
MKDWWQETFP KGRQSLIISD VHGYPVQIAY GEKGTGRPLF LIHGMGSWSY NWRYSVGPLS 
KFFRVICVDA KGFGFSDKPC LRQEKNGHQV IELERIIQCL CDEPAIVVAE SLGALVALAL
AQRNAELIGR LVVINAPIFT ESLPHWAMSI LAQTPIEILQ TIDDLRLAYL FAPIVREVMA
IERRKVLFDP SILTQEDVYW ITYPFIEIPG TLVKVAEELQ IAAREIENWQ ANKPNMLSEI
QNKLNTIEAP TLILWGDKDS WFPASHGKKL HQHLPNSKLQ ILDNCYHDAS TGSAKVVNKE
ILQFLKETDF L