Gene Ava_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3081 
Symbol 
ID3681061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3828860 
End bp3829546 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content39% 
IMG OID637718426 
Productribonuclease III 
Protein accessionYP_323585 
Protein GI75909289 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.569411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAA TTCTAATATT TCGTGATGAA AAACTTTTAC GCCGCGCCCT TACCCATCGT 
TCTTATGTAA ATGAAAATCC AGAAGAAGGT GAACATAATG AACGCTTAGA ATTTCTTGGT
GATGCGATAT TAAATTTCTT AAGTGGTGAG TATCTCTATC GGAGTCACCC TGACAGGGGA
GAAGATGAAT TAACGCGACG GCGTTCGGCT TTGGTAGATG AAAAACAACT AGCAAAATTT
GCCATTGAGG TAGGCTTAGA TTTTCGGATG CGCCTGGGGA AAGGTGCTAT TCGAGATGGC
GGTTATCAAA ATCCTAATTT ACTTAGCAGC ACTTTTGAAG CGGTGATTGG TGCTTATTAT
TTAGATAATA ATTCCAATAT TGAAGCCGTA CGCGTAATTA TAGAACCTTT ATTTGAATCT
GTACCCGAAC AAATTGTAGT GGTGCGTTCT AATGTAGATT CAAAAAATCG GTTTCAGGAA
TGGGTACAAC GAAACATCGG CCCAACTCCT CCCAAATACT TAACAAAACA AATAAGTGGC
CCTTCTCATG CCCCAGAGTT TCAAGCTAAA GTTTTGGTAG GAGAAAAAGA GTATGGGGAA
GGTATAGGTA AAAATAAAAA AGAGGCTGAG AAAGCAGCCG CCGAAAATGC TTTAGCTAAT
TTGAATAAAC AAGAATTATT GCCATAA
 
Protein sequence
MHKILIFRDE KLLRRALTHR SYVNENPEEG EHNERLEFLG DAILNFLSGE YLYRSHPDRG 
EDELTRRRSA LVDEKQLAKF AIEVGLDFRM RLGKGAIRDG GYQNPNLLSS TFEAVIGAYY
LDNNSNIEAV RVIIEPLFES VPEQIVVVRS NVDSKNRFQE WVQRNIGPTP PKYLTKQISG
PSHAPEFQAK VLVGEKEYGE GIGKNKKEAE KAAAENALAN LNKQELLP