| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3081 |
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| Symbol | |
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| ID | 3681061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3828860 |
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| End bp | 3829546 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637718426 |
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| Product | ribonuclease III |
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| Protein accession | YP_323585 |
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| Protein GI | 75909289 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.569411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACAAAA TTCTAATATT TCGTGATGAA AAACTTTTAC GCCGCGCCCT TACCCATCGT
TCTTATGTAA ATGAAAATCC AGAAGAAGGT GAACATAATG AACGCTTAGA ATTTCTTGGT
GATGCGATAT TAAATTTCTT AAGTGGTGAG TATCTCTATC GGAGTCACCC TGACAGGGGA
GAAGATGAAT TAACGCGACG GCGTTCGGCT TTGGTAGATG AAAAACAACT AGCAAAATTT
GCCATTGAGG TAGGCTTAGA TTTTCGGATG CGCCTGGGGA AAGGTGCTAT TCGAGATGGC
GGTTATCAAA ATCCTAATTT ACTTAGCAGC ACTTTTGAAG CGGTGATTGG TGCTTATTAT
TTAGATAATA ATTCCAATAT TGAAGCCGTA CGCGTAATTA TAGAACCTTT ATTTGAATCT
GTACCCGAAC AAATTGTAGT GGTGCGTTCT AATGTAGATT CAAAAAATCG GTTTCAGGAA
TGGGTACAAC GAAACATCGG CCCAACTCCT CCCAAATACT TAACAAAACA AATAAGTGGC
CCTTCTCATG CCCCAGAGTT TCAAGCTAAA GTTTTGGTAG GAGAAAAAGA GTATGGGGAA
GGTATAGGTA AAAATAAAAA AGAGGCTGAG AAAGCAGCCG CCGAAAATGC TTTAGCTAAT
TTGAATAAAC AAGAATTATT GCCATAA
|
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| Protein sequence | MHKILIFRDE KLLRRALTHR SYVNENPEEG EHNERLEFLG DAILNFLSGE YLYRSHPDRG
EDELTRRRSA LVDEKQLAKF AIEVGLDFRM RLGKGAIRDG GYQNPNLLSS TFEAVIGAYY
LDNNSNIEAV RVIIEPLFES VPEQIVVVRS NVDSKNRFQE WVQRNIGPTP PKYLTKQISG
PSHAPEFQAK VLVGEKEYGE GIGKNKKEAE KAAAENALAN LNKQELLP
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