| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3072 |
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| Symbol | |
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| ID | 3681052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3811819 |
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| End bp | 3812448 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637718417 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_323576 |
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| Protein GI | 75909280 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.875677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGGCG TAATGGTAGT TGCTGCTTCC CATGTAATAA GGGCGGGATT ATCTGCGGTG
ATAGCGGGTA ATCCTCAGAT GACTGTTGTG GGCAGTGTAT CAGATATAGA TGGAATGACC
AAGGAAATTC AGCAATTACA ACTAGATGTA GTGCTGTTAG ATTGGGGCAG AAACTCTCAA
TCAGATTGGG ATAAATTACT AGTCATACAA GAACAACAAG ACTCATTGAG AGTGATGCTG
ATTGTCAAAG AACTGGAGGG AATTGATATA GAAGCAGCAC TACGTTCTGG CGTGCGGGGT
ATATTACTTG ATACCAGCAC AGAATCAGAA ATTTTAACAG CAATTGAAGC GATCGCCCTT
GGTCTCATTG TCATACATCC AGATGTCCTA GAATTTTTTT CTGTACGGGA AAAAGCAGTA
ACTAATCCTG TCCAATCATT GACACCGAGA GAAATAGAGG TTTTACAAAT GCTTGGTTCC
GGCTTAGGAA ATAAAGCGAT CGCTCAAAGT CTACATATTT CCGACCATAC AGTGAAGTTT
CATGTTTCCT CTATCTTTCA AAAACTAGCT GTTTCCACCC GCACCGAAGC CGTTACCGTT
GGTGTTCGAC TAGGCTTAAT TCTCTTGTAA
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| Protein sequence | MIGVMVVAAS HVIRAGLSAV IAGNPQMTVV GSVSDIDGMT KEIQQLQLDV VLLDWGRNSQ
SDWDKLLVIQ EQQDSLRVML IVKELEGIDI EAALRSGVRG ILLDTSTESE ILTAIEAIAL
GLIVIHPDVL EFFSVREKAV TNPVQSLTPR EIEVLQMLGS GLGNKAIAQS LHISDHTVKF
HVSSIFQKLA VSTRTEAVTV GVRLGLILL
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