Gene Ava_3037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3037 
Symbol 
ID3681155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3762009 
End bp3763373 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content46% 
IMG OID637718383 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_323542 
Protein GI75909246 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTT CTAACCGCCG CTATCACATC ACTACCTTTG GTTGCCAAAT GAATAAAGCC 
GACTCAGAGC GCATGGCTGG CATCTTAGAA GACATGGGCT TTGAGTTTTC CGAAGATCCC
AACAATGCAG ATGTGATTCT CTACAATACT TGTACAATTC GGGATAATGC TGAACAGAAA
GTCTATTCTT ACCTCGGCAG ACAAGCCAAG CGCAAACACG AACAACCAGA CTTAACTTTA
GTTGTAGCTG GTTGTGTTGC CCAACAGGAA GGCGAAGCAC TACTACGGCG AGTACCAGAA
CTAGATTTAG TCATGGGGCC ACAACACGCC AACCGTCTCA AAGATTTGCT GGAGTCGGTG
TTTGCGGGTA ATCAAGTCGT TGCTACTGAA GCCGTCCATA TTATGGAAGA TATCACCCAG
GCGCGGCGAG ATAGCACCGT GACAGCTTGG GTAAATGTGA TTTATGGCTG CAATGAACGC
TGTACTTATT GTGTAGTTCC CAACGTGCGC GGTGTGGAAC AGTCTCGTAC ACCGGAAGCC
GTTCGTGCAG AAATGGAAGA ATTAGGACGG CAAGGTTACA AAGAAATCAC CCTACTTGGT
CAAAATATTG ACGCTTACGG TAGAGATTTA CCGGGTGCGA CACCAGAAGG ACGACACCTA
CACACCTTTA CAGACTTACT GTATTACGTC CATGATGTGC CAGGTATAGA AAGAATCAGA
TTTGCTACCA GCCATCCCCG TTATTTTACG GAGAGACTAA TTAAAGCTTG TGCAGAGTTG
CCCAAAGTTT GCGAACATTT CCACATTCCT TTTCAATCTG GCGATAACCA ACTATTGAAA
GCGATGGCAC GGGGTTACAC TCAGGAGAAA TATCGCCGGA TTATCGACAC AATTCGTAGA
TATATGCCAG ATGCTTCCAT TAGTGCTGAT GCAATTGTTG GGTTCCCAGG AGAGACAGAG
GAACAGTTTG AGAATACTTT GAAACTGGTG GATGATATTG GCTTTGACCA ATTAAACACA
GCCGCCTATT CACCCCGTCC CGGCACACCA GCAGCTTTAT GGGAAAATCA ACTGAGTGAA
GAAACCAAAA GCGATCGCCT ACAAAGATTA AACCATTTAG TGAACGTGAA AGCAGCCGAG
CGATCGCAAC GTTACATGGG GCGCATCGAG GAAGTTTTAG TAGAAGAACA AAACCCCAAA
GATCAAACCC AAGTCATGGG ACGCACACGC GGTAATCGTC TCACCTTCTT CAAGGGAGAT
ATTAATGAAC TAAAAGGGCA ATTAGTCAAG GTGAAAATTA ACGAAGTTCG CGCTTTTAGT
TTGACTGGTG AACCGATAGA AATACGGCAA GCTGTACAAG TTTAA
 
Protein sequence
MTTSNRRYHI TTFGCQMNKA DSERMAGILE DMGFEFSEDP NNADVILYNT CTIRDNAEQK 
VYSYLGRQAK RKHEQPDLTL VVAGCVAQQE GEALLRRVPE LDLVMGPQHA NRLKDLLESV
FAGNQVVATE AVHIMEDITQ ARRDSTVTAW VNVIYGCNER CTYCVVPNVR GVEQSRTPEA
VRAEMEELGR QGYKEITLLG QNIDAYGRDL PGATPEGRHL HTFTDLLYYV HDVPGIERIR
FATSHPRYFT ERLIKACAEL PKVCEHFHIP FQSGDNQLLK AMARGYTQEK YRRIIDTIRR
YMPDASISAD AIVGFPGETE EQFENTLKLV DDIGFDQLNT AAYSPRPGTP AALWENQLSE
ETKSDRLQRL NHLVNVKAAE RSQRYMGRIE EVLVEEQNPK DQTQVMGRTR GNRLTFFKGD
INELKGQLVK VKINEVRAFS LTGEPIEIRQ AVQV