| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2985 |
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| Symbol | |
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| ID | 3681278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3704071 |
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| End bp | 3704880 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637718331 |
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| Product | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A |
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| Protein accession | YP_323490 |
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| Protein GI | 75909194 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00797438 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.749856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACTT TGATAGTAAC CCTGGCGAGT GTGTTCGTTT TCGCCTTGGG TGCATCTATT
GGCAGCTTTA TTAATGTTGT AGTTTATCGA TTACCGGCAG GATTATCCAT CCTGTGGCCG
CCCTCCCGTT GTCCTCATTG CCTAAACCAA CTGAAAGCCT ATGATAATGT GCCTGTGCTG
GGCTGGATAT GGTTAAAAGG GCGTTGTCGT TATTGTAAAA GTCAAATTTC TCTGAGATAC
CCTGTAGTGG AAGCAGTGAC AGGGATCATT TTTCTTTGCG TATTTTTGAT ATTTCACGTT
TCAATTCTGA CCTTAGGATA CTGGACGTTT TGCAGCTGGC TATTAGCATT GTCCTTAATT
GATTTAGATA CTATGACCCT ACCTAATCCC CTCACCAAAT CAGGATTAGT CTTGGGTTTG
GTCTTTCAAA TGGTTGTTGG CTATGCCTCT GACCCTAGTT TGCCAGGATT AATTAGACAC
TTAATGATGG GCATTGTTGG CGCTGTCTTG GGTTTATGGT TATTTGAGGC GATCGCTCTT
TTAGGAGTTT TCTTACAAAA AGAGGCGATG GGTGCAGGAG ATGCCAAGCT TGCTGCCATG
ATGGGTGCTT GGTTGGGTTG GCGATATTTA CTTCTGGCTG GATTGATTGC CTGTACTTTA
GGCACATTGG TAGGTATTGG GGCTATCATG CTCTCGAAAC GCAAATGGGG GCAAAAAATT
CCCTTTGGCC CTTTCCTCGC CTCAGGAGCT TTTATCACTC TCTTTGGTGG ACAACCAATT
TTGTCAGCTT ATTTACAGTT GTTTTTTTAA
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| Protein sequence | METLIVTLAS VFVFALGASI GSFINVVVYR LPAGLSILWP PSRCPHCLNQ LKAYDNVPVL
GWIWLKGRCR YCKSQISLRY PVVEAVTGII FLCVFLIFHV SILTLGYWTF CSWLLALSLI
DLDTMTLPNP LTKSGLVLGL VFQMVVGYAS DPSLPGLIRH LMMGIVGAVL GLWLFEAIAL
LGVFLQKEAM GAGDAKLAAM MGAWLGWRYL LLAGLIACTL GTLVGIGAIM LSKRKWGQKI
PFGPFLASGA FITLFGGQPI LSAYLQLFF
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