Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2978 |
Symbol | |
ID | 3681271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3694924 |
End bp | 3696321 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637718324 |
Product | hypothetical protein |
Protein accession | YP_323483 |
Protein GI | 75909187 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0931999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTG ATTTAATCAA AATAATCATA ACAAATAATA AAAACTTACT CATTGCTGTA CTTATTACCA TTTTAGGTAC ATGGCTAAGA GTTTATAACT ATGCTGTTGT ACCGGACGAA AATTTTACAT TTGATGAGTA TGCTTTTGCC TGGAGTGGCA TGAGTTTAAT CCAGAATTCT GTACCTACTT CCTGGTCTTA TCTTTCCGCA TACGATACCG ACAAATTGAC GAGGATTGAA TGGCTAGGAA AGAAAAATTT ATATTTAGTT ACACCTTGGT TTGATCATCC ACCTTTATTT GGTTTAATTG TCGGCGGATT TGCTATATTG CTTGGTGCAA ATACTTTTTG GGAATGCACC ACACAATTAA TTAGAATCCC TAGCCTCATC TTTTCTAGTA TATCTATTTT TATTTTTTAT TTTATTAATC ACAAACTCTT TAATACCAAG ATAGCCACTA TTACAACATT GATATTTGCA ACTGACCCCT TATTTGTATA TTTATCTAGA TTGGCAGTTA GTGAAAATTT ATTAATTTTA TTATTATTAG GTAGTATATT TTGTTTTCTA GAATATTTAA ATAAATCACG CACCATGTAT TTTTATATAC TAGTGGCGCT GACTAGCCTT GCCCCTTTGG TAAAAGTAAC GGGTCTATCT ATTGTTGCAG CTTTATCATT AATGTTTGTA TATAAGAAAA AGCTCCGAGA TGGCTTAATA GTTATGACGG CTGGGATTTT TGCATTTTCT CTATACTTTG TTTATGGTTG GTTTTATGAT TTTAAGCTAT TTATATCTGT ATTAAAAGCA CATTCTCAGC GTTTCAATAG CATTCTCATC TTAAAGGAAA TGATATTTTC TGGCAATCTC CCTTTTATAG ATGCTTGGTT TATTCTTGGT TGGATGACTC TGCCCTATGC AATGAAAAAT TTAGTGAGTA ACTATAAAAT TCAGTTAATT TATTTACCAC TAATAACATA CTTATTTATG TCAATATTTT CGGGCGCACA GAGTCACTTT TATTGTTGGT ATACCATCCC TTTGTATCCA TTTCTGTTAA TATCATCAGG CTATTTTATT GGTGATTTCA TTAAAAAACC TTCCCTTCTA AATTCTTCCG TTATAATTAT TATTATATTT TCTTGGTGTC TAAACTACGG ACTGGGACAT CCCTGGTCTA ATTTTTATAT TTTAAATCTT AAAGGATTTA AGTACATTTT TATAGCATTA ATATCTATCG TATATGCACC CATCGTTATC CAAGAAGTAT TAAGAACTAA AAAGCTGTTA TTTCTTAATA GAGTCATAGC AATTCTAGTT TTTAGCAGTT GCATTGTTGC CAATATATTA ATTACTTACA ATTTAAAACA AATTTTACAG AGCAACTTAA TTGAATAA
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Protein sequence | MNTDLIKIII TNNKNLLIAV LITILGTWLR VYNYAVVPDE NFTFDEYAFA WSGMSLIQNS VPTSWSYLSA YDTDKLTRIE WLGKKNLYLV TPWFDHPPLF GLIVGGFAIL LGANTFWECT TQLIRIPSLI FSSISIFIFY FINHKLFNTK IATITTLIFA TDPLFVYLSR LAVSENLLIL LLLGSIFCFL EYLNKSRTMY FYILVALTSL APLVKVTGLS IVAALSLMFV YKKKLRDGLI VMTAGIFAFS LYFVYGWFYD FKLFISVLKA HSQRFNSILI LKEMIFSGNL PFIDAWFILG WMTLPYAMKN LVSNYKIQLI YLPLITYLFM SIFSGAQSHF YCWYTIPLYP FLLISSGYFI GDFIKKPSLL NSSVIIIIIF SWCLNYGLGH PWSNFYILNL KGFKYIFIAL ISIVYAPIVI QEVLRTKKLL FLNRVIAILV FSSCIVANIL ITYNLKQILQ SNLIE
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