Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2961 |
Symbol | |
ID | 3681331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3668895 |
End bp | 3669659 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637718308 |
Product | ABC transporter-like |
Protein accession | YP_323467 |
Protein GI | 75909171 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.215204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTA TGCCGCAAAC CAAATCAGCA ACAATTGAAT TCCGTGATGT TACATTTAGC CGTAATCATC GTCTTCTTGT ATCCCATCTC AACTTTGCCA TCTACGAAGG AGAAGCACTA GTATTACTGG GACGTAGCGG TAGTGGCAAA ACTACCACCA TGAAATTAAT CAATCGTCTG TTTACACCCA CCCAAGGCGA AGTTTTATTT CAAGGAATAC CTACGAATCA GTGGGATGAA ATTAAACTGC GGCGCAAGAT TGGTTATGTA ATTCAAGAAA CGGGGCTATT TCCCCATTTC ACTGTAGAAC GCAACGTGGG TTTAGTCCCA ACTTTAGAAG GCTGGCTACC CAAACAAATT AAGACGCGGG TTTATGAATT GCTGCACTTG GTAGGCTTAG ATCCAGCACA ATTCGCTCAA CGTTACCCTC ATGAATTATC TGGAGGACAA AGGCAAAGAG TCGGTGTCGC TAGAGCTTTA GCCGCAGATC CCCCAGTTAT GTTGATGGAT GAACCCTTTG GCGCACTTGA TCCCATTACA CGCTTAGAAC TGCAACGAGA GTTTCAGCGA TTACAACAGG AATTAGGTAA GACAGTGGTT TTTGTTACTC ACGATATCCA AGAAGCCTTC GTTTTAGCAT CAAGAATTGG GTTAATGTAT GGAGGAGAGT TGGTATTTTT AGGAACCAAA GATGAATTTA TTGCTTCCCA GCATCCAGAA AGTCTTGCTT TTCTACAATG CCTGTATTCT CTACAAACTA GCTAA
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Protein sequence | MNIMPQTKSA TIEFRDVTFS RNHRLLVSHL NFAIYEGEAL VLLGRSGSGK TTTMKLINRL FTPTQGEVLF QGIPTNQWDE IKLRRKIGYV IQETGLFPHF TVERNVGLVP TLEGWLPKQI KTRVYELLHL VGLDPAQFAQ RYPHELSGGQ RQRVGVARAL AADPPVMLMD EPFGALDPIT RLELQREFQR LQQELGKTVV FVTHDIQEAF VLASRIGLMY GGELVFLGTK DEFIASQHPE SLAFLQCLYS LQTS
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