Gene Ava_2961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2961 
Symbol 
ID3681331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3668895 
End bp3669659 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content42% 
IMG OID637718308 
ProductABC transporter-like 
Protein accessionYP_323467 
Protein GI75909171 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.215204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTA TGCCGCAAAC CAAATCAGCA ACAATTGAAT TCCGTGATGT TACATTTAGC 
CGTAATCATC GTCTTCTTGT ATCCCATCTC AACTTTGCCA TCTACGAAGG AGAAGCACTA
GTATTACTGG GACGTAGCGG TAGTGGCAAA ACTACCACCA TGAAATTAAT CAATCGTCTG
TTTACACCCA CCCAAGGCGA AGTTTTATTT CAAGGAATAC CTACGAATCA GTGGGATGAA
ATTAAACTGC GGCGCAAGAT TGGTTATGTA ATTCAAGAAA CGGGGCTATT TCCCCATTTC
ACTGTAGAAC GCAACGTGGG TTTAGTCCCA ACTTTAGAAG GCTGGCTACC CAAACAAATT
AAGACGCGGG TTTATGAATT GCTGCACTTG GTAGGCTTAG ATCCAGCACA ATTCGCTCAA
CGTTACCCTC ATGAATTATC TGGAGGACAA AGGCAAAGAG TCGGTGTCGC TAGAGCTTTA
GCCGCAGATC CCCCAGTTAT GTTGATGGAT GAACCCTTTG GCGCACTTGA TCCCATTACA
CGCTTAGAAC TGCAACGAGA GTTTCAGCGA TTACAACAGG AATTAGGTAA GACAGTGGTT
TTTGTTACTC ACGATATCCA AGAAGCCTTC GTTTTAGCAT CAAGAATTGG GTTAATGTAT
GGAGGAGAGT TGGTATTTTT AGGAACCAAA GATGAATTTA TTGCTTCCCA GCATCCAGAA
AGTCTTGCTT TTCTACAATG CCTGTATTCT CTACAAACTA GCTAA
 
Protein sequence
MNIMPQTKSA TIEFRDVTFS RNHRLLVSHL NFAIYEGEAL VLLGRSGSGK TTTMKLINRL 
FTPTQGEVLF QGIPTNQWDE IKLRRKIGYV IQETGLFPHF TVERNVGLVP TLEGWLPKQI
KTRVYELLHL VGLDPAQFAQ RYPHELSGGQ RQRVGVARAL AADPPVMLMD EPFGALDPIT
RLELQREFQR LQQELGKTVV FVTHDIQEAF VLASRIGLMY GGELVFLGTK DEFIASQHPE
SLAFLQCLYS LQTS