| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2959 |
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| Symbol | |
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| ID | 3681329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3667211 |
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| End bp | 3668119 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637718306 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_323465 |
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| Protein GI | 75909169 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.496699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAGAT TTTTAATATT TTTCTTATTA TCTTTGACTT TGGTGCTGGC GATCGCTAGT
TGTAGTCCCA GCACAAATAC AACTAATGGC GATATTATTA TCGCCTCAAA AGACTTTACG
GAACAAGATA TTCTAGGTGA AATTTTAGCA CAGCAAATTG AAGAGACTAC TAGCTTAAAA
GTAGCTCGCC GTCCGCGATT GGGTGGCTCT TTTGTTTGTC ATAATGCGAT TCTTGCTGGC
AAGATAGATG CTTATATTGA ATATACTGGC ACCGCTTTTA CTGGTATATT AAAACAACCA
GTAATTAATA ATCCTCAAGT AGTTTACGAG AAGCTAAAAC AAGCTTATAG TCAACGGTTT
CAACTAGAGG TAATGCCTAG CTTAGGTTTT GAAAATACAT TTGCCATCAT TGTTCGAGGT
GAAGATGCGA GGCGCTATAA CATCCAAACT CTCACAGACG CGGCTCAATA TACACCCCAA
TGGCGCGGTG GCTTTGGCTA TGAATTTTTA GAACGAGAGG ATGGTTTTCC TGGGTTAGCC
AAGACTTACG GTTTAAAGTT TACTAAACCA CCACAAATTA TGGACTTGGG TTTAATATAT
CGTGCCTTGA TTCAAAAACA AGTTGATATG GTAGCGGGTA ACTCGACAGA TGGACAAATT
GCTCGTTTGG GTTTAGTAGT TCTCAAAGAT GATCAACAAT ACTTTCCTCC GTACGAAGCA
ACACCAATTG TCAGACAAGA AACCTTAAAA AAATATCCCC AATTAAAAAC AGCGATCGCG
CAATTAACTG GTAAAATTGC TGCTGATGAA ATGCGACAAC TCAATTATTT AGTTGAAGGC
GAATTACAGG ACATAAAAGA AGTAGCAAGG GAGTTCCGTA AATCCAAAGG ACTCATCAAA
ACTCTCTAA
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| Protein sequence | MKRFLIFFLL SLTLVLAIAS CSPSTNTTNG DIIIASKDFT EQDILGEILA QQIEETTSLK
VARRPRLGGS FVCHNAILAG KIDAYIEYTG TAFTGILKQP VINNPQVVYE KLKQAYSQRF
QLEVMPSLGF ENTFAIIVRG EDARRYNIQT LTDAAQYTPQ WRGGFGYEFL EREDGFPGLA
KTYGLKFTKP PQIMDLGLIY RALIQKQVDM VAGNSTDGQI ARLGLVVLKD DQQYFPPYEA
TPIVRQETLK KYPQLKTAIA QLTGKIAADE MRQLNYLVEG ELQDIKEVAR EFRKSKGLIK
TL
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