| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2956 |
|---|
| Symbol | |
|---|
| ID | 3681326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3663990 |
|---|
| End bp | 3665402 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637718303 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_323462 |
|---|
| Protein GI | 75909166 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.328394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTCAGA AAATTTTGAT AACTGGGGTG ATTACCCTAC TACTGCTGAC AATTCCTGTT
ATGGGTAGTG CTTGGGCGCA AGTCCCAGCA ACGGCTCCAC CTGCTGATAC AGGAGATACA
GCATTTATGC TGATTTCATC AGCCCTAGTC TTGCTGATGA CACCAGGATT GGCATTTTTC
TACGGTGGAT TTGTACGATC GCGCAATATT CTCAATACAT TGATGATGAG TTTTGTATTG
ATGGCGATCG TCGGCGTTAC TTGGGTTTTA TGGGGTTATA GTCTGTCATT TGCGCCAGGA
CTGCCATTTA TTGGTGGTTT ACAGTGGTTT GGGTTAAACG GTGTGGGGCT AGAAACCACA
GGTTATCTGC AAGGTTCAGA GCCGACAAAT GTGGTTTCTT ATGCCGGGAC GATTCCCCAT
CAGGCATACA TGATATATCA AGCCATGTTT GCCATTATCA CCCCAGCCTT AATTTCTGGA
GCGATCGCCG AACGGATGAG TTTCCGTGCC TATTGCCTAT TTGTGCTACT GTGGTCAACC
TTTGTTTACA CGCCTCTAGC CCACATGGTT TGGGCAAAAG GTGGATTATT AGGTTTGTAC
GGTGGCTTAG GCGCGCTCGA CTTCGCCGGC GGTACAGTAG TTCATATTAG CTCTGGGGTT
TCTGCCCTCG TGGCCGCAAT AGTCCTGGGA CCGAGGAAAA CCCATCCCGA TCGCCTCAGC
CCTCCCCACA ACGTAACATT TATTTTGTTG GGTGCTGGTT TGCTATGGTT TGGCTGGTTC
GGTTTTAATG CTGGGAGTGC CTTATCTGTT GCTAGTAGCA CTTCTGGCAG TTTCATTACT
AATCCAGCCA CAACTGCCTT TGTTGCCACC AATACCTCAG CCGCAGCTGG GGCTTTAATG
TGGCTAATTC TAGAAGGAGT ATTACGCGGT AAACCCACCG CCGTAGGTGC AGCCACAGGC
GCAGTTGCCG GTTTAGTAGG GATTACCCCA GCCGCCGGCT TTGTCACCCC TCTAGCGTCA
ATTTTGATAG GTTGTATCAC AGCTTTTGTT TGCTTCTATG CCGTAAGTTT CAAACACAAG
TTAAATGTTG ACGATGCCTT AGATACCTAC CCGGTGCATG GTGTTGGTGG AACAGTTGGC
GCAATTCTCA CAGCCTTGTT TGCCACCGCC GAAGTTAACT CAGGCGGTAA AAACGGCGTA
CTCAAGGGTA ATTTTGGTGA ACTAGGTGTG GAACTGGCCG CCATTGTCAT CGCCTATGTA
ATTGCAGCAG TTGGCACTTG GATAATTTTG AAGATCATTG ATGCTAGCGT TGGCTTACGG
GTGAAAGAAG AAGCCGAATA TCAAGGTTTG GATATCAACG AACACGGAGA AGAAGCATAC
AACTCCGAGT TTAGCGATCG CATCGTACCG TAA
|
|---|
| Protein sequence | MFQKILITGV ITLLLLTIPV MGSAWAQVPA TAPPADTGDT AFMLISSALV LLMTPGLAFF
YGGFVRSRNI LNTLMMSFVL MAIVGVTWVL WGYSLSFAPG LPFIGGLQWF GLNGVGLETT
GYLQGSEPTN VVSYAGTIPH QAYMIYQAMF AIITPALISG AIAERMSFRA YCLFVLLWST
FVYTPLAHMV WAKGGLLGLY GGLGALDFAG GTVVHISSGV SALVAAIVLG PRKTHPDRLS
PPHNVTFILL GAGLLWFGWF GFNAGSALSV ASSTSGSFIT NPATTAFVAT NTSAAAGALM
WLILEGVLRG KPTAVGAATG AVAGLVGITP AAGFVTPLAS ILIGCITAFV CFYAVSFKHK
LNVDDALDTY PVHGVGGTVG AILTALFATA EVNSGGKNGV LKGNFGELGV ELAAIVIAYV
IAAVGTWIIL KIIDASVGLR VKEEAEYQGL DINEHGEEAY NSEFSDRIVP
|
|---|
| |