Gene Ava_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2936 
Symbol 
ID3681365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3640264 
End bp3641103 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content47% 
IMG OID637718283 
Productphycobilisome linker polypeptide 
Protein accessionYP_323442 
Protein GI75909146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.993675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAC CTCTGCTGGA ATATGCACCT TCTTCACAAA ACCAACGTGT AGAAGGTTAC 
GAAGTACCAA ACGAAGATAC CCCAACTATT TATCGGTTAG CTGCGGCGAT CGATGATGCC
GATGTTGATG CCATTATTTG GGCAGCATAT CGGCAAATTT TCAGCGAACA CCTGATTATT
AAAAGCAATC GTCAATCCTT CTTAGAATCT CAACTACGGA ACCGGGCAAT CAACGTCCGT
GATTTTATCC GGGGATTGGG CAAATCAGAA GTTTACCGCA CCCAGGTAGC AGAACTCAAC
TCCAACTACC GTTTAGTTGA CATCACCTTA AAGCGGTTTT TGGGACGTGC AGCTTATAAC
CAAGATGAAG AAATCGCTTG GTCAATTGTC ATTGGCACTC AGGGTTTACA TGGTTTTATT
GATGCTCTGT TAGACAGCGA CGAGTATAGA GAAAACTTCG GTGATGACAT CGTACCCTAC
CAACGCCGAC GCTATAAAGA CAGACCCTTT AACCTAGTTA ACCCCCGGTA TAACGCATAT
TGGCGCGATC GCCAAACCCT CACCGCCCTG GGAGGACGTT CCTTCTACAA CGCCCGTACT
TCTGGCACTT TAACAAAAGA CGATATTCGT CGCGCCATTC CCGCCAACTT CATGGCATTG
GCAGGTAAAA TCCTCACCCC AGAACGGAAC TACCAGCGCA CCATCGCTTC CGTCACCTCC
CAAATTAAAG ATATAAAAAT TCCTGACACC AGCCGCGAAG TAACAACCCC CGAAGTCACC
GTTAAACCAG TGGCCGTAGC TTTGCCATAT CGTTATATCC CTGGTAACAA GACCACTTGA
 
Protein sequence
MSIPLLEYAP SSQNQRVEGY EVPNEDTPTI YRLAAAIDDA DVDAIIWAAY RQIFSEHLII 
KSNRQSFLES QLRNRAINVR DFIRGLGKSE VYRTQVAELN SNYRLVDITL KRFLGRAAYN
QDEEIAWSIV IGTQGLHGFI DALLDSDEYR ENFGDDIVPY QRRRYKDRPF NLVNPRYNAY
WRDRQTLTAL GGRSFYNART SGTLTKDDIR RAIPANFMAL AGKILTPERN YQRTIASVTS
QIKDIKIPDT SREVTTPEVT VKPVAVALPY RYIPGNKTT