Gene Ava_2929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2929 
Symbol 
ID3681358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3635012 
End bp3635653 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content46% 
IMG OID637718276 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_323435 
Protein GI75909139 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAG CCTCATTTAG CGTACAAATC AATAGCAATG GAACCCCGGA AGAAGCGATG 
CCTACGGTAA GCTACGCTAA TCCTACCATT CACTCTACGG CTGCCGATGC AACACGAGAT
GCCGCCGCTA TTACCACCTT AATCGCAGCA TTTCATCATC ACCATCCTGC TGTTAGAAGT
GCGGCTGTAG ATGAATTAAT CAAATTGGGA AGCATCACAG TGAATTTGTT AATTGCTGCT
TATGATGATT CTCAAGATCA AGGTTTTCAA GCCCAAATCA TTCAAGTTTT AGCTCAAATT
GGTGATGCAA AGGCGCTAAA CTTATTAGCC GAGGTAGTGG GGACAAGTGT AGCTAATCAC
TGTCAAGGTA ATGTCCGCCG CATTGCTGCA AGAGGGTTAG GCAAAATCGC CAGCACCACC
AGCAATCCAG AAATTATCAA TAATGCCCAA GAAAAGTTAA TCTGGGCATT ACTTACCCCC
GAAGATTGGG GTCTACGTTA TGCTGCTGCG GTCTCTTTAC AAGAAATTGC CACGCCAAAA
GCTAAAGCTG CTTTACAACA AGCGATCGCC CAAGAAACTG ATCCCGTTGT TCGCACACGT
ATGGCGATCG CTTTGAGTGA GGAAGCAAGG GAGAGGAACT GA
 
Protein sequence
MNQASFSVQI NSNGTPEEAM PTVSYANPTI HSTAADATRD AAAITTLIAA FHHHHPAVRS 
AAVDELIKLG SITVNLLIAA YDDSQDQGFQ AQIIQVLAQI GDAKALNLLA EVVGTSVANH
CQGNVRRIAA RGLGKIASTT SNPEIINNAQ EKLIWALLTP EDWGLRYAAA VSLQEIATPK
AKAALQQAIA QETDPVVRTR MAIALSEEAR ERN