Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2885 |
Symbol | |
ID | 3681449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3583512 |
End bp | 3586169 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637718230 |
Product | hypothetical protein |
Protein accession | YP_323391 |
Protein GI | 75909095 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0417447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACGCA TCGCGTTGGA TGGTCGTGAT ATTGGCGCTT ATATTTTAAC GAAAGGAACT CAGAAAGATA AATTTTGCTT TGTTTTTGGG TTTGAATGTA AAGGCATCCA TACCACTTTA AGAAAAGAAC AAATAGACAC AATCTTCAAT AACATTGAAT CTGGATTAAA AGACATTCCC GAAGGGGAAA GAATGACACT GCACATGGGG TCTTTTAGTT CAGATCAACA AAGGCAAACA GAATTAACAG ACTTGATTAG GCGCGCTCCC TCTAGAGATA TTAAATATTT GTTGATGGCG GAGAGAGCTA GAGCGCAAGA ACTCACTGCT GCGGGAATTC GTAAGCCAAA ATTCCTGAAA ATATACGTTA CATATACAAT TGAACCGAGT TCCACCAATG CCGATGATTG GATTGAAAAA CTGTTAGGAA AAGCAGAAGG ATGGTGGTTA AAGTTCAAAG GTGACATTGC AGAAGTTGAA AACCAACGAA TCGAAAGTGT GATTGCTAAA GCTTACCAAC AGGGATTTTG TCGTTGGGAG CAACTTTTAT CTAACAAAAT GGGTTTAGAT ATTAAACCTT TAAATGCGGT GGAACTTTGG GAAAACGTTT GGAGAAGGTT TAATGATACC CAACCAATCG AGATTCCCCA ATTAGTAACC CTGGATGAAA ATGGACTGTA TGAACAAGCT CATTCAGAAT TATCGAGTAC GCAATTATTG ATAGAAAATA TCCACAGTAC AACACTGTTG ATGGAGTCTG GTGTACCTTG TGCCGATCGC CGTTGGGTCA ATGTGAATAA TAATTACATT GGGGCGATGA CTTTTTTGGA AAAACCAGGT GGCTGGCCGA ATAAATTTGC CCAACTGCGT TATCTATGGG AACTCTTGGC GAGGGAATCG GTAGTAGATA CAGAAATTGT TTGTCAACTA ACGGCGGCGA ACCCAGCTTT GGTGAAGACA ACCCTGCAAA GAGTGCTGAA GCAGTCGAAC ATGACGGCTA TGTTAGCACA GGAAAAGAGT AAGACGATTG ATGTCAACGC TCAATTGAAA TTGAGAAAAT CCGTTGCAGC TCAAGAACAA TTATTTGAAG GAGCCGTACC AATTTACACA GGTTTGGCTA TTTTTGTCCA TCGTCCCAGT GTTGAGAAAT TGGATGAAGC CACACGGTAT ATTGAAAACT GCTTTCAACG TCCGGCGCGG GTGGTACGAG AAACTGAATA TGCTTGGAAG ATTTGGCTAC AGTCTTTACC AATAGTTTGG GAAGGTTTAT TAGTCAAACC CTTTAACCGT CGCCAGTTGT ATTTAACTAG TGAAGTACCT GGTTTAATGC CTTTAGTGAT TACCAAAGCT GGTGATAAAC ATGGTTTTGA ATTAATTGCC GAAGAAGGCG GTACACCAGT ACAGTTAGAT TTATTCAACC AACATAAGAA TTTAGCCTTG TTTGCGACTA CCCGCGCAGG TAAATCAGTG TTGGTGTCAG GAATTCTAAC CCAGGCTTTG GCGCATGGGA TTCCCGTAGT CGCCTTAGAT TTTCCTAAAC CTGATGGGAC ATCTACCTTT ACCGACTATG CCCATTTTAT GGAAGGGAAT GGTGCATATT TCGATATTTC TAAACAATCA AATAATTTAT TTGAGCAGCC AGATTTACGA TCGCTCGATC CAGAACAACA ACGCGATCGC CTACTCGATT ATACGGGCTT TTTGGAATCA GCCCTCATGA CAATGGTGTT AGGCTCATCC AACGACAACC AACTATTAAC ACAAACCGTC CGTTCCCTAC TCAACTTGGC TTTAAGCGCC TTCTTCGCTG ATAAAGGGAT ACAAGAAAGA TATAAAATGG CGATCGCTGG TGGATTTGGT ACTCCAGCCT GGCAAAAAAC CCCTACTCTC CACGACTTTC TGCATTTTTG TTCCCCAGAA CATCTGCAAC TAGATTCTGT CAGTGGCCGA GTGGAAGATG CACTCAGTCA AATTCATCTG CGCTTACGTT TTTGGCTTTC CAGCCGCGTA GGACAAGCCA TATCTGCACC CTCTAGCTTT CCTACAGACG CACAACTATT GGTATTTGCA TTACGCAACC TCTCAGATAA CGAAGATGCA GCCGTACTAT CCTTAAGTGC TTATTCAGCC GCCTTACGCC GCGCCTTAAG TAGTCCAGCC TCCATATTCT TTATTGATGA AGCACCGATT TTATTTGAAT TTGATCAAAT ATCTGATTTA GTGGGTAGGA TGTGTGCGAA CGGCGCTAAA GCTGGGATTA GGGTTATTTT ATCTGCACAA GACCCCGATA CAATCGCCAA ATCTAAAGCC TCATCCAAAA TTTTACAGAA CTTGACCACA CGATTAATTG GTCGTATCCA ACCAGTTGCA GTAGATAGTT TTGTCAGCAT CCTCAAATAT CCCAGAGAAA TTATTGCACG TAACGCCTCA GAAAGCTTTT TCCCTCGCAA AGAAGGCGTT TATAGCCAAT GGCTATTAGA TGATAATGGC ATTCATACCT TCTGTCGTTA TTATCCAGGT TATGAACAAT TGGCAGTAGT TGCTAATAAT CCTAACGAGC AAACAGCACG TCAACAAGCA ATGCAAGATT ACAGAAATAA ATATGAAGCA ATATCAGTAT TTGCACGTCA GTTAGTAGCT AGTTTGCGTA ATAGTTAA
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Protein sequence | MLRIALDGRD IGAYILTKGT QKDKFCFVFG FECKGIHTTL RKEQIDTIFN NIESGLKDIP EGERMTLHMG SFSSDQQRQT ELTDLIRRAP SRDIKYLLMA ERARAQELTA AGIRKPKFLK IYVTYTIEPS STNADDWIEK LLGKAEGWWL KFKGDIAEVE NQRIESVIAK AYQQGFCRWE QLLSNKMGLD IKPLNAVELW ENVWRRFNDT QPIEIPQLVT LDENGLYEQA HSELSSTQLL IENIHSTTLL MESGVPCADR RWVNVNNNYI GAMTFLEKPG GWPNKFAQLR YLWELLARES VVDTEIVCQL TAANPALVKT TLQRVLKQSN MTAMLAQEKS KTIDVNAQLK LRKSVAAQEQ LFEGAVPIYT GLAIFVHRPS VEKLDEATRY IENCFQRPAR VVRETEYAWK IWLQSLPIVW EGLLVKPFNR RQLYLTSEVP GLMPLVITKA GDKHGFELIA EEGGTPVQLD LFNQHKNLAL FATTRAGKSV LVSGILTQAL AHGIPVVALD FPKPDGTSTF TDYAHFMEGN GAYFDISKQS NNLFEQPDLR SLDPEQQRDR LLDYTGFLES ALMTMVLGSS NDNQLLTQTV RSLLNLALSA FFADKGIQER YKMAIAGGFG TPAWQKTPTL HDFLHFCSPE HLQLDSVSGR VEDALSQIHL RLRFWLSSRV GQAISAPSSF PTDAQLLVFA LRNLSDNEDA AVLSLSAYSA ALRRALSSPA SIFFIDEAPI LFEFDQISDL VGRMCANGAK AGIRVILSAQ DPDTIAKSKA SSKILQNLTT RLIGRIQPVA VDSFVSILKY PREIIARNAS ESFFPRKEGV YSQWLLDDNG IHTFCRYYPG YEQLAVVANN PNEQTARQQA MQDYRNKYEA ISVFARQLVA SLRNS
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