Gene Ava_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2780 
Symbol 
ID3681713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3434207 
End bp3434806 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content41% 
IMG OID637718126 
Productaminodeoxychorismate synthase, glutamine amidotransferase subunit 
Protein accessionYP_323288 
Protein GI75908992 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0512] Anthranilate/para-aminobenzoate synthases component II 
TIGRFAM ID[TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTATAG TCATCGATAA TTACGACAGC TTTACTTATA ATTTGGTGCA GTACTTGGGA 
GAACTAGCAT CTGATTTCCC TGTCGCATCA GATATTCAAG TTTTTCGCAA CGATAAGATA
ACTTTAGATG AGATCCGAGG ATTAAATCCT GATGCGATCG TCATTTCTCC TGGGCCTGGT
CGTCCAGAAG ATGCAGGTAT ATCTTTAAAT TTAATTCAAG AACTCGGTAC TAACCTGCCA
ATTTTAGGCG TATGTTTAGG CCATCAAAGC ATTGGTCAGG TATTTGGTGG TAATATTGTC
TCTGCTCCAG AGTTAATGCA CGGCAAAACT TCTCAGGTAA CTCACACTGG GGTCGGGGTT
TTTCAAGGAT TAGAGAATCC TATGATTGCT ACCAGATATC ATAGTCTGGT AATTGACCGC
CCAACTTGCC CCGAAGTGTT AGAAATTACT GCTTGGGTAG ATGATGGTAC GATTATGGGA
GTGCGACACC GGAACTATCC TCACATTCAA GGAGTCCAAT TTCACCCAGA GAGTGTTTTA
ACATCTTTAG GAAAACAGTT ACTACGAAAT TTTCTGGAAC AGTTACAGTT ACGAGAATAA
 
Protein sequence
MIIVIDNYDS FTYNLVQYLG ELASDFPVAS DIQVFRNDKI TLDEIRGLNP DAIVISPGPG 
RPEDAGISLN LIQELGTNLP ILGVCLGHQS IGQVFGGNIV SAPELMHGKT SQVTHTGVGV
FQGLENPMIA TRYHSLVIDR PTCPEVLEIT AWVDDGTIMG VRHRNYPHIQ GVQFHPESVL
TSLGKQLLRN FLEQLQLRE