Gene Ava_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2729 
Symbol 
ID3682090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3368428 
End bp3369420 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content46% 
IMG OID637718074 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_323237 
Protein GI75908941 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.223385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAAACT TAGGCATCGC AATTACCGGA AGTGGTTCAG CAGCACCTGA AACTTCCCTT 
CACAACGAAG AATTAAGCCA ACTGGTAGAG ACATCAGACG AGTGGATAAG TACCAGAACG
GGAATCCGCC AACGGCGTTT AGCCCTACCG ACTGAATCAT TAAGCAGTCT GGCGGCGGCA
GCTAGTAGAC AGGCGATCGC CTCGGCTGGA ATTACAGCAT CCGATATAGA TTTGATTTTA
CTGGCAACTT CCACACCTGA CGATCTGTTC GGTACTGCTA CTAAAATCCA AGCTGAATTG
GGAGCTACTA AAGCCGTAGC TTTTGATTTA ACAGCAGCCT GTTCCGGCTT CGTCTTTGGT
CTAGTCACAG CAGCCCAATT TATCAGAACT GGCGTATATC AGAATGTACT GTTGATCGGG
GCTGATATCC TCTCCCGTTG GGTAGATTGG CAAGACAGAC GTACTTGCGT GCTATTTGGT
GACGGTGCTG GGGCTATTGT ATTGCAGTCC AACCAAAGCG ATCGCTTATT AGGATTTGCC
CTCAAAAGTG ATGGGACACA AAACCATTAT CTCAACCTAG CTTATCAAGG CACTGCCCAA
GAAATTCTCC CCAACATCAA GATCACTCAA GGCACATATC AACCCGTAAC CATGAACGGC
AAAGAAGTTT ACCGCTTTGC TGCTCAAAAA GTCCCAGAAA TCATTGATAA AGCTTTATTT
GAAGCCAATA TTACTGTTGA CCAAATCGAT TGGCTACTAC TACATCAAGC AAATCAACGC
ATTCTTGATA CTGTAGCTCA ACGCCTAAAT ATTCCTGCAC ACAAAGTGAT TAGTAATCTT
GCTAATTACG GCAATACCTC CGCCGCATCC ATCCCCCTAG CCCTAGATGA AGCCGTGCGA
GAAGGTAAAA TAAAACCCAA CGATATCATT GCTACATCCG GCTTTGGAGC CGGTCTAACA
TGGGGTGCAG CAATTTTCCA ATGGGGAAGA TAA
 
Protein sequence
MQNLGIAITG SGSAAPETSL HNEELSQLVE TSDEWISTRT GIRQRRLALP TESLSSLAAA 
ASRQAIASAG ITASDIDLIL LATSTPDDLF GTATKIQAEL GATKAVAFDL TAACSGFVFG
LVTAAQFIRT GVYQNVLLIG ADILSRWVDW QDRRTCVLFG DGAGAIVLQS NQSDRLLGFA
LKSDGTQNHY LNLAYQGTAQ EILPNIKITQ GTYQPVTMNG KEVYRFAAQK VPEIIDKALF
EANITVDQID WLLLHQANQR ILDTVAQRLN IPAHKVISNL ANYGNTSAAS IPLALDEAVR
EGKIKPNDII ATSGFGAGLT WGAAIFQWGR