Gene Ava_2683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2683 
Symbol 
ID3682044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3318665 
End bp3319453 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content38% 
IMG OID637718028 
Productputative ABC-2 type transport system permease protein 
Protein accessionYP_323191 
Protein GI75908895 
COG category[R] General function prediction only 
COG ID[COG4587] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.144995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.513277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CTATTAGAAA AGCATGGACT TTGCTGACAG TTTACTACGC CTATATGGTT 
GAGTATCGAG CAGAACTAAT CCTATGGGTC TTGTCTGGTT CTTTGCCAAT TATTTTGATG
GGTGCTTGGA TAAAGGCGGC GCAAGGTGGT AGCTTTGGTT TATCGCCCGT GGATTTTGCC
CGTTACTTTC TCACAGTTTT TATTGTGAGA CAAATATCCG TTGTTTGGGT AATTTGGGAG
TTTGAAAAAG AAGTAGTAGA AGGTAAATTA TCACCTAAAT TATTACAGCC ATTAGATCCA
GTATGGCATC ACGTTGCATC CCATCTTTCA GAAAGGGTTG CTCGCATACC TTTTGCAATA
TTATTAATAG GGTTATTTTT TATTCTTTAT CCCCAGGCGT TGTGGTTTCC AACCGTTAGT
CAATTATTGT TATTTACAGT AGCTGTATCA TTGGCTTTTG TACTGCGGTT TGTAATTCAA
TACACATTTG CTATGTTCGC CTTTTGGACG GAAAGGGCTA ACGCTATAGA AAATTTTTGG
TTTTTATTTT ATTTATTTTT ATCTGGATTA ATTGCACCTT TAGATGTGTT TCCTCCCCAA
ATAAAAGCGA TAGTTTTATT TACACCCTTT CCCTACTTGA TTGATTTTCC CGCCAGTTTG
TTGGTAGGGC TACCTGTAGA TGTAGTACAG GGATTTTTGT CACTACTGGC TTGGATATTC
ATGTTTTGGG TGGTAAATCG TTTGCTGTGG CGTGCAGGAT TGAAAAAATA TTCAGGAATG
GGAGCTTAA
 
Protein sequence
MKKTIRKAWT LLTVYYAYMV EYRAELILWV LSGSLPIILM GAWIKAAQGG SFGLSPVDFA 
RYFLTVFIVR QISVVWVIWE FEKEVVEGKL SPKLLQPLDP VWHHVASHLS ERVARIPFAI
LLIGLFFILY PQALWFPTVS QLLLFTVAVS LAFVLRFVIQ YTFAMFAFWT ERANAIENFW
FLFYLFLSGL IAPLDVFPPQ IKAIVLFTPF PYLIDFPASL LVGLPVDVVQ GFLSLLAWIF
MFWVVNRLLW RAGLKKYSGM GA