Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2683 |
Symbol | |
ID | 3682044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3318665 |
End bp | 3319453 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637718028 |
Product | putative ABC-2 type transport system permease protein |
Protein accession | YP_323191 |
Protein GI | 75908895 |
COG category | [R] General function prediction only |
COG ID | [COG4587] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.144995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.513277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CTATTAGAAA AGCATGGACT TTGCTGACAG TTTACTACGC CTATATGGTT GAGTATCGAG CAGAACTAAT CCTATGGGTC TTGTCTGGTT CTTTGCCAAT TATTTTGATG GGTGCTTGGA TAAAGGCGGC GCAAGGTGGT AGCTTTGGTT TATCGCCCGT GGATTTTGCC CGTTACTTTC TCACAGTTTT TATTGTGAGA CAAATATCCG TTGTTTGGGT AATTTGGGAG TTTGAAAAAG AAGTAGTAGA AGGTAAATTA TCACCTAAAT TATTACAGCC ATTAGATCCA GTATGGCATC ACGTTGCATC CCATCTTTCA GAAAGGGTTG CTCGCATACC TTTTGCAATA TTATTAATAG GGTTATTTTT TATTCTTTAT CCCCAGGCGT TGTGGTTTCC AACCGTTAGT CAATTATTGT TATTTACAGT AGCTGTATCA TTGGCTTTTG TACTGCGGTT TGTAATTCAA TACACATTTG CTATGTTCGC CTTTTGGACG GAAAGGGCTA ACGCTATAGA AAATTTTTGG TTTTTATTTT ATTTATTTTT ATCTGGATTA ATTGCACCTT TAGATGTGTT TCCTCCCCAA ATAAAAGCGA TAGTTTTATT TACACCCTTT CCCTACTTGA TTGATTTTCC CGCCAGTTTG TTGGTAGGGC TACCTGTAGA TGTAGTACAG GGATTTTTGT CACTACTGGC TTGGATATTC ATGTTTTGGG TGGTAAATCG TTTGCTGTGG CGTGCAGGAT TGAAAAAATA TTCAGGAATG GGAGCTTAA
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Protein sequence | MKKTIRKAWT LLTVYYAYMV EYRAELILWV LSGSLPIILM GAWIKAAQGG SFGLSPVDFA RYFLTVFIVR QISVVWVIWE FEKEVVEGKL SPKLLQPLDP VWHHVASHLS ERVARIPFAI LLIGLFFILY PQALWFPTVS QLLLFTVAVS LAFVLRFVIQ YTFAMFAFWT ERANAIENFW FLFYLFLSGL IAPLDVFPPQ IKAIVLFTPF PYLIDFPASL LVGLPVDVVQ GFLSLLAWIF MFWVVNRLLW RAGLKKYSGM GA
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