Gene Ava_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2613 
Symbol 
ID3681077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3235423 
End bp3235986 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content48% 
IMG OID637717960 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_323123 
Protein GI75908827 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.387005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACTT TTTTACTGTT GATGGCGGAA GCCAGCGCCG TTGGAGGTGA ATTGGCAGAA 
GGTGGGGCGG AAGGTGGTTT TGGTTTAAAT ACCAATATTC TCGACACCAA CCTGATTAAC
CTGGCCATTA TTATTACTGT GCTGTTTGTC TTTGGACGGA AGGTTCTGGG TAATACCCTG
AAAACTCGCC GCGAAAACAT TGAAACAGCA ATTAAGAATG CAGAACAACG TGCCGCAGAT
GCAGCCAAGC AACTGAAAGA GGCGCAACAA AAACTAGAGC AAGCACAAGC AGAAGCTGAG
AGAATCAAAA AATCAGCCCA AGACAATGCT CAAACCGCAG GTCAAGCCAT CCTCGCCCAA
GCTGCTGTAG ATATTGAACG CTTACAAGAA GCAGGGGCAG CAGACTTGAA TGCAGAACTA
GATAGAGCGA TCGCTCAGTT GCGGCAGCGA GTAGTTGCTT TGGCATTGCA AAAAGTCGAG
TCGGAACTGC AAGGCGGCAT TGCTGACGAT GCTCAAAAGA TTTTAATTGA CCGTAGCATC
GCACAATTGG GAGGCGAAGT ATGA
 
Protein sequence
MGTFLLLMAE ASAVGGELAE GGAEGGFGLN TNILDTNLIN LAIIITVLFV FGRKVLGNTL 
KTRRENIETA IKNAEQRAAD AAKQLKEAQQ KLEQAQAEAE RIKKSAQDNA QTAGQAILAQ
AAVDIERLQE AGAADLNAEL DRAIAQLRQR VVALALQKVE SELQGGIADD AQKILIDRSI
AQLGGEV