Gene Ava_2592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2592 
Symbol 
ID3680918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3209345 
End bp3210706 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content41% 
IMG OID637717939 
ProductBeta-ketoacyl synthase 
Protein accessionYP_323102 
Protein GI75908806 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3321] Polyketide synthase modules and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAAAA TCGCCATCAT TGGCTTATCA TGCCTGTTTC CTGATGCTAA TAATCCTGAG 
CAATTTTGGC AGAATCTCAC CGAGCAGAAA GATTCGACAT CATCTGTAAC TGTTGCCCAA
ATGGGTGTAG ATCCCACAAT ATTTTACGAC CCGGTAAAAG GCAAGCCGGA AAAATTTTAT
TTTCTCAAAG GTGGATTTAT TCAAAACTTC CAATTTGATG CTAGTGAATA CAATCTGCCA
TCAGAATATG TGGAAAGCTT GGATAATACC TTCAAATGGT CGCTATATGC GGCTAAACAA
GCAATAAAAC ATAGTGGTTA TTGGGGAAAT CAAGATGTCC TATCTAAATG TGGAGTCATT
TTAGGTACTC TCTCTTTCCC AACTAAGCTT TCTACTCAAC TGGTTACACC TATTTATCGA
CAAACTATAG AACCTGCTGT TGCCGAACTT TTACAAAATC AAGATTTTCA TCTGGCTGCT
TTACCTACAG CAACTAAACC ATCTCTACAT AATGCGATGA TATCTGGTTT ACCAGCCGCA
TTAGTTGCTC AGGCTTTCTC TCTATCAGGT ACTCATTTCT GTATCGATGC GGCTTGTTCT
TCTGCTTTCT ACGCTATCAA GTTAGCATCT CATTATCTGT GGACAGGTAA GGCTGATGTA
ATGTTAGCTG GTGCTATTAG TTGCTCAGAC CCTTTGTTTT TGCGGATGTT GTTTTCTGGG
ATTCAAGGCT ATCCAGAAAA TGGGATTAGC TCTCCTTTAG ATAAATCATC CAGAGGCTTA
GTTACATCCG AAGGCATTGG TATGGTAATG CTAAAACGAT ATAGCGATGC TGTGAGGGAT
GGGGATAAAA TTCTGGCTAC AGTTTGTGGT AATGGTCTTT CTAATGATGG GAAGGGTAAG
CATTTGCTCA GTCCCAACAC GAAAGGGCAA GTTACAGCTT TTGAGAGAGC CTATAAAGAA
GCCCAACTTA GCCCCAAAGC TATAGATTAT ATGGAGTGTC ACGCTACCGG CACTTTGTTA
GGAGATACGA CGGAATTTAA TTCCATCGAA AGCTTTTTTG GAGAACATCA AGCCGCACCA
TTAATAGGTT CAAGCAAAGC TAATGTAGGT CACTTGTTAG TTGCGGCGGG GATGGTGAGT
TTAACGAAGG CGATTTACGG CATGAATTAT GGTGTGATTC CACCCACGAT TAATGTCAAT
GACCCTATAG GTACTGAAAA CAATGTCATT TCTCCCCAAA ACATTGTTCG GACTCCCACA
GCCTGGCCTA TCAATACCGG AACTAAACAC GCGGCTTTAA GTGCTTTCGG TTTTGGTGGT
ACAAACTCCC ATCTGATTTT GGAAAAAGCA GCAGATTTGT AG
 
Protein sequence
MEKIAIIGLS CLFPDANNPE QFWQNLTEQK DSTSSVTVAQ MGVDPTIFYD PVKGKPEKFY 
FLKGGFIQNF QFDASEYNLP SEYVESLDNT FKWSLYAAKQ AIKHSGYWGN QDVLSKCGVI
LGTLSFPTKL STQLVTPIYR QTIEPAVAEL LQNQDFHLAA LPTATKPSLH NAMISGLPAA
LVAQAFSLSG THFCIDAACS SAFYAIKLAS HYLWTGKADV MLAGAISCSD PLFLRMLFSG
IQGYPENGIS SPLDKSSRGL VTSEGIGMVM LKRYSDAVRD GDKILATVCG NGLSNDGKGK
HLLSPNTKGQ VTAFERAYKE AQLSPKAIDY MECHATGTLL GDTTEFNSIE SFFGEHQAAP
LIGSSKANVG HLLVAAGMVS LTKAIYGMNY GVIPPTINVN DPIGTENNVI SPQNIVRTPT
AWPINTGTKH AALSAFGFGG TNSHLILEKA ADL