Gene Ava_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2486 
Symbol 
ID3682837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3082253 
End bp3082642 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content41% 
IMG OID637717829 
Producttransposase IS4 
Protein accessionYP_322996 
Protein GI75908700 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.915363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0938271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTGATA GTCTAGGACT TTTGTTAAAA GTCGTTGTCA GTGAAGCAAA CGCCCCAGAA 
CGAGTACTTG CTGCTTACGC ACTCATGGAA TTGCTAGAAG AACGCCCGGA ATTACTGGAA
AAAGTTAAAG TTATGTGGGT TGATTCTGGT TACGACGGTG ATAAATTTGC ACTCTGTGTT
TGGTTGATGA TCCAAGCTCA TGTTGAAGTC ATACGGCGTA CTGAACAAGA ATTTCAAGTT
TTGCCTAAAC GTTGGGTAGT AGAAAGAACA TTTGGGTGGT TTAACCAATA CCATCGTCTT
AGTAAAGATT ATGAGCGTCT TACCGAAATG AGCGAAGCAG CCATATATGC TGTTATGACT
AGAATTATGC TACGTCGTCT TGTCTCCTAA
 
Protein sequence
MVDSLGLLLK VVVSEANAPE RVLAAYALME LLEERPELLE KVKVMWVDSG YDGDKFALCV 
WLMIQAHVEV IRRTEQEFQV LPKRWVVERT FGWFNQYHRL SKDYERLTEM SEAAIYAVMT
RIMLRRLVS