Gene Ava_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2407 
Symbol 
ID3683206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2995441 
End bp2996220 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content32% 
IMG OID637717752 
Producthypothetical protein 
Protein accessionYP_322919 
Protein GI75908623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0217494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000001692 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCAATT TATCTGATAA AGAATTAATA GAACAATTAC ATAGAACTTG GGTTCAATTC 
TTAATTAATA GTGAACGAAA AGACTGCGCA GCAATTATGA TTGATGCTGA ATTGTCATTT
GACTATGAAT GGGATGAATA CTATTCACGT AATTATATTT CAGGATTGCT TATATTCCTT
CCGTTTAACT TGATGTTGAC AGTCTTAAAT AATGAAGAAA TTCAAAGCTA CCTAAAAAAT
ACTTTTTTAT TCATTGCTAA TGGCCATGTC TGGAATAATA TGCAATCTTT TCCAATTTAT
TACCGAATAA AATTATTACA AGTAGAAAAA AACTGGCAAA AAACTATTAA ATTTCTCATT
GCTAAATCAA AAGACTTAAA TCAAGGGCTT GTTACTGAGA AAGCTTTTGC TCGGAAAGGT
AGAGAGCCGA TTATTTATAA TGAAATAAAG TTTGCATCAC AGTCTGAAAT TAGGATTGCA
CAAGAATTAG AAGCTCAAGG TGTTTTGTTC TTTCCTCTAC CTCTAGCTGT AAGACATGAA
ACAGGTAATA TTTATGAAGA TCATCGAGAG GTAGACTTTC TAGTTTGTCT AGATGGAACA
TCTGGAATTT TAGAGATTTC TTTCCATGAA GGTAGGTATG AGAAGGATAA GGAAAAAGAT
GCTTGGTTTA AAAAATCAGG AATTCTCTGT ATTGAACATT ACCCTGCTGA AAAGTGCTAT
CACCAGCCAA AAGTAGTTGT AGAAGAGTTC TTGAGCTTTC TTTCTAAACA CAAAAGATAA
 
Protein sequence
MPNLSDKELI EQLHRTWVQF LINSERKDCA AIMIDAELSF DYEWDEYYSR NYISGLLIFL 
PFNLMLTVLN NEEIQSYLKN TFLFIANGHV WNNMQSFPIY YRIKLLQVEK NWQKTIKFLI
AKSKDLNQGL VTEKAFARKG REPIIYNEIK FASQSEIRIA QELEAQGVLF FPLPLAVRHE
TGNIYEDHRE VDFLVCLDGT SGILEISFHE GRYEKDKEKD AWFKKSGILC IEHYPAEKCY
HQPKVVVEEF LSFLSKHKR