Gene Ava_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2378 
Symbol 
ID3683221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2957137 
End bp2957553 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content44% 
IMG OID637717724 
Producthypothetical protein 
Protein accessionYP_322891 
Protein GI75908595 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0358179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATCG ACTCTGCACC TGTCACCCTT GCCGGCGTAA ATCCGACTAT CAGCCAGCCA 
GAAATAGAAG AAAGTACTCA GTCCCATCTG GCTACTGCAA TTATTGAGCC AGTTGAGGAT
AGTCCTAAAA AGCAGGAACC AGCTTTGGCT GTATTTGCTA CTACCTTTGT GACTATTTTT
CTGGCAGAAA TTGGCGATAA AACCCAGTTA TCGACTCTAT TGATGAGTGC AGAGTCTCAT
TCACCTTGGG TAGTATTTCT CGGTTCGGGA GCAGCATTAA TTACCACAAG TTTGTTAGGT
GTCCTCCTGG GTAGTTGGGT TTCTAAACGC TTCAGCCCTA AAACCTTGGA TAAATCAGCC
GGAATCATGC TGCTATTTAT CTCCCTCACT TTGTTTTGGG ATATCTTTCA CGGATAA
 
Protein sequence
MKIDSAPVTL AGVNPTISQP EIEESTQSHL ATAIIEPVED SPKKQEPALA VFATTFVTIF 
LAEIGDKTQL STLLMSAESH SPWVVFLGSG AALITTSLLG VLLGSWVSKR FSPKTLDKSA
GIMLLFISLT LFWDIFHG