Gene Ava_2277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2277 
Symbol 
ID3678944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2832413 
End bp2833270 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content43% 
IMG OID637717622 
ProductDelta-9 acyl-phospholipid desaturase 
Protein accessionYP_322790 
Protein GI75908494 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.134636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAA AACATCTGGC AATCGCCCCT GAGGGGAAGA AGTCATTGCG CCTCAATTGG 
ACAAATGTGG CATTTTTTAC CACTGTTCAC GCTCTAGCTT TGTTGGCTCC TTGGTTTTTT
TCCTGGTCAG CATTGGGTTT GCTGTTGTTT CTCCACTGGT TGTTTGGCAG CATTGGCATT
TGCCTTGGGT ATCATAGATT ACTTAGTCAT AAAAGTTTTC AAGTACCCAA ATGGTTGGAA
TATGCGATCG CCACTATCGG CGCATTGGCT ATGCAGGGAG GGCCAATTTT TTGGATTGGG
GGACACCGCC AGCATCATGC TCACACCGAA GATGTCAATT TAGATCCATA TTCTTCCCAG
CGTGGATTTT GGTGGAGCCA TATGTTGTGG ATTTTATATC CCCGCTCCGA ATTTTTCGAC
TATGAAATCT ATCAAAAGTA TGCGCCTGAC TTAGCAAGAC AACCATTTTA TCGTTGGTTA
GATCGTTATT TTCTCCTGTT GCAAATTCCT TTTGGATTAC TGCTTTACGC TATCGGAGGA
TGGTCTTTTG TAATTTATGG TGTAGTTCTT AGAGCAGTAT TGCTATGGCA TTCCACTTGG
TTTGTCAACT CTGCCACCCA TATGTGGGGC TATCGTACCT TTAACGCTGA CGATAACGCA
CGTAATTTGT GGTGGGTATC TATAGTAACC TATGGCGAAG GTTGGCACAA CAACCATCAT
ACTTTTCCCA ACGTAGCAAA AGCTGGATTC CAGTGGTGGG AAGTTGATGT CACTTGGTGG
AGTATTAAAC TGTTGCAGAC TTTAGGTTTG GCGAAGAAAG TAGTTTTACC ACCTTCACAA
AGAATGAATC AAGGATGA
 
Protein sequence
MTVKHLAIAP EGKKSLRLNW TNVAFFTTVH ALALLAPWFF SWSALGLLLF LHWLFGSIGI 
CLGYHRLLSH KSFQVPKWLE YAIATIGALA MQGGPIFWIG GHRQHHAHTE DVNLDPYSSQ
RGFWWSHMLW ILYPRSEFFD YEIYQKYAPD LARQPFYRWL DRYFLLLQIP FGLLLYAIGG
WSFVIYGVVL RAVLLWHSTW FVNSATHMWG YRTFNADDNA RNLWWVSIVT YGEGWHNNHH
TFPNVAKAGF QWWEVDVTWW SIKLLQTLGL AKKVVLPPSQ RMNQG