Gene Ava_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2202 
Symbol 
ID3679681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2734390 
End bp2735043 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content39% 
IMG OID637717546 
Producthypothetical protein 
Protein accessionYP_322717 
Protein GI75908421 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0558608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTAA ACGCAGAGGG GCGCGGAGGG AAACGCGGAG GGGCGCGGAG AGTTTTTATT 
AGTGCAGTTG AGAAAAAGGA GTTGGTTATG GTTGCAAGTC CAGACCGGAA TTATATGTCT
CCTCAAGAAT ATCTGGAATG GGAAGAACGC CAAGATATTA AATATGAGTA TGTCAATGGT
GAAGTTTTTG CCATGACTGG GGGAACTCTT CCTCATACTA CTATTGCTTT AAACTTAGCA
TCAGCATTAA AAAGCCATGT ACGCGGTGGT TACTGTCGTG CTTTTATGTC TGACGCGAAA
GTAGCAGTAT CTGAGGGTAT GTCGTTTCAT TACCCTGATG TTGTTGTGAG TTGTGATGAA
AGAGATAGAC AAGCCATTAA ATTTCTTCAG TATCCTTGTC TAATTGTCGA AGTTTTATCT
CCAAGTACAG AAGCTTATGA CCGAGGTGCT AAATTTAAGC AATATCGCCG CATTCAAACC
CTAAAAGAAT ATGTCCTAAT TGATGCAGAA AAAATCAATT TAGATTGTTT TCGGTTAAAT
AAAAACTGTA TTTGGGAGTT GTATTCTTAC GAAGAGGGAA ACGAGGTTTA TTTGCAGAGT
GTTGATTTTC GATTTCCCAT ATCTCTGGTT TATGAGGATG TGTTTTTGGG TTAA
 
Protein sequence
MFLNAEGRGG KRGGARRVFI SAVEKKELVM VASPDRNYMS PQEYLEWEER QDIKYEYVNG 
EVFAMTGGTL PHTTIALNLA SALKSHVRGG YCRAFMSDAK VAVSEGMSFH YPDVVVSCDE
RDRQAIKFLQ YPCLIVEVLS PSTEAYDRGA KFKQYRRIQT LKEYVLIDAE KINLDCFRLN
KNCIWELYSY EEGNEVYLQS VDFRFPISLV YEDVFLG