Gene Ava_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2152 
Symbol 
ID3680099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2663607 
End bp2664635 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content35% 
IMG OID637717495 
Producthistidine kinase 
Protein accessionYP_322667 
Protein GI75908371 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.72788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGTG AACAAGAAAT CCAGAGGCTG GAAAAAGCTA ATAGAATCCT TCAGAAAAAA 
TTAATTCGTT CAGAGGTTGA TAGAGTTAGG TTAGAGGAAA CTAACAGCAA AAAGGAAACT
TTGCTTAAGA ATGTAATTAA TGAATTAAAG CAATCACAAA TTCAATTAGA AGACAGGAGG
CATGAATTAG AGAAAACCCT GTTTAATCTT CAGACAATGC AGGATAAAAT GTCTGCCTTA
GGTAGTATGG TTGCAGATGT AGCTCACGAA ATTAATAATC CTGTGGGATT TATCATGGGG
AATTTGAACC CAGCATTTGA GTATATTCAT GAGTTATTCC GTCTGCTTGA CTTGTATCAG
CAATATTACC CCGAACCATG CCCAGAAATC CAGGCAGAAA TGACAGCAAT GGATTATGAA
TATGTGCGTG AGGATTTGCC TAAACTTATT TCCTCAATGA AAGAAGGAAC TGATCGCATT
AGCAAGCTTA GTAATAGTTT ACGGACTTTT TCCCGAACAG ATGCAGAATA TAAATTGCTT
TTTAATATTC ATGAAGGGAT TGACAGTACT CTTTATATTC TTCAGCATCG TTTAAAGGCT
ACTCAAGACC GTCCACAAAT TCAAGTAGTT AAAAAGTATG CGGATATTCC TTTAATTGAA
TGTTTTCCCG GTCAATTGAA TCAGGTGTTT ATGAATCTTT TAGCTAATGC TATAGATGCG
TTGGAAGAGT CTAATTTTGG GTTAAGTTTT GCGGAGATTG AGCAAAAAAA CAATCAAATT
ACGATTATCA CTAGTTTATT CGCCAATTCT ATTTTAATTC AGGTTCAAGA TAATGGTTTT
GGGATATCAA ATGAATTAAA ATCAAAGATA TTTGAACATT CATTTACTAC TAAACCTGTT
GGTAAAGGTA CAGGATTAGG GTTAGCGATC GCTCAACAAA TTATTGTTCA AAAACATGGT
GGAAGGCTGG AGGTTAATTC AGTTCCAGGA GAGGGTTCGG AATTTATTAT TACCCTTCCT
ATCGAATGA
 
Protein sequence
MNCEQEIQRL EKANRILQKK LIRSEVDRVR LEETNSKKET LLKNVINELK QSQIQLEDRR 
HELEKTLFNL QTMQDKMSAL GSMVADVAHE INNPVGFIMG NLNPAFEYIH ELFRLLDLYQ
QYYPEPCPEI QAEMTAMDYE YVREDLPKLI SSMKEGTDRI SKLSNSLRTF SRTDAEYKLL
FNIHEGIDST LYILQHRLKA TQDRPQIQVV KKYADIPLIE CFPGQLNQVF MNLLANAIDA
LEESNFGLSF AEIEQKNNQI TIITSLFANS ILIQVQDNGF GISNELKSKI FEHSFTTKPV
GKGTGLGLAI AQQIIVQKHG GRLEVNSVPG EGSEFIITLP IE