| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2150 |
|---|
| Symbol | |
|---|
| ID | 3680097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2660863 |
|---|
| End bp | 2662194 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637717493 |
|---|
| Product | response regulator receiver Signal transduction histidine kinase |
|---|
| Protein accession | YP_322665 |
|---|
| Protein GI | 75908369 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.394463 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGATA CATCAACCGA AACTAGCTTT ATTTTAGTTG TAGATGATAC CCTCACCAAT
CTCGAAATTA TCTCTGAAGC ATTGATTGGC GCAGGTTTTG AAGTAGCCAC CGCAGTTGAT
GGAAAAAAAG CGCTCGAACA GATACAAAGT AGAGTGCCAG ATTTAATTCT GTTGGATGTA
ATGATGCCGG TAATGGACGG ATTTGAAACC TGTAAAAACT TGAAAATTCA GCCAGAAACT
CACGATATTC CCGTGATTTT CATGACAGCA ATTACTGATA CAAATAGTAA AGTAGAAGCC
TTAAGTTTAG GCGCAGTTGA TTACATTACT AAGCCATTCC ATAAAGCAGA AGTTTTGGCT
CGTATTTCTG CCCATCTGCA ACTGAGAAGC TTGAATAAAA ATTTAGAAAA ACGAGTTATT
GAACGCACGG CTGAATTGAA TCAAGCATTG AAAGACCTAC AAGAGTATCA ACTCCAACTT
GTACAACAGG AAAAAATGTC TGTGCTTGGA CAATTAGTAG CAGGATTAGC TCATGAAATT
AATAACCCAG TCAGTTGTAT TTATGGCAAT TTAGGTCACG CTTTGACGTA TTTTGAAAAT
ATGGATAAGC TGATTAATTT ATATCAAAGT TATTATCCCC AGCCTGTACA AGAAATTCAA
AACGAAATCA GTGAAATGGA TTTAGCCTAT GTGCGTTCTG ACCTGCCCAA TTTAATTTTC
TCTATGAAAG AAGGCATTCA GCGCATCCGA GATATTAGCA GGAGTCTACG TATTTTTTCC
AGGTCAGACA CAGAAAAAAA AATTCAGTTT GATATTCATG AAGGGATTGA TAGTACTATT
TTAATACTCA AGCATCGATT GAAAGGATCT GAGAATCACC CTGACATTGA AATTAAACGA
GATTATGGTG TCATACCTCA AGTTAACTGC TTTCCTGGGC AATTGAATCA GGTGTTCATG
AATATTTTAG CTAATGCAAT TGATGCCTTA GAAGAATCAT TTAGTAATAA TTATTATTCA
GTAATAGATA GTGAAATTAC TGTTAATCAG GAAATGATGG CTGAGACTCC GCAGATCATA
ATTCAGACAA TACTGAGTGA AGATGAAAGT TATGCTTTAA TTAAAATTAA AGATAACGGC
ATAGGAATGC CACAGCAAAT TAAAGAGAGA ATTTTTGATA ATTTGTTTAC TACTAAACCT
GTAGGTAAAG GTACAGGTTT AGGATTATCA ATTGCTCGGC AAATTATCAT TCAAAAACAT
GGTGGTAAAC TTGAGGTAAA TTCAGAACCA GGAAGAGGCT CAGAATTTAT TATTAACATC
CCCATTGAAT AA
|
|---|
| Protein sequence | MLDTSTETSF ILVVDDTLTN LEIISEALIG AGFEVATAVD GKKALEQIQS RVPDLILLDV
MMPVMDGFET CKNLKIQPET HDIPVIFMTA ITDTNSKVEA LSLGAVDYIT KPFHKAEVLA
RISAHLQLRS LNKNLEKRVI ERTAELNQAL KDLQEYQLQL VQQEKMSVLG QLVAGLAHEI
NNPVSCIYGN LGHALTYFEN MDKLINLYQS YYPQPVQEIQ NEISEMDLAY VRSDLPNLIF
SMKEGIQRIR DISRSLRIFS RSDTEKKIQF DIHEGIDSTI LILKHRLKGS ENHPDIEIKR
DYGVIPQVNC FPGQLNQVFM NILANAIDAL EESFSNNYYS VIDSEITVNQ EMMAETPQII
IQTILSEDES YALIKIKDNG IGMPQQIKER IFDNLFTTKP VGKGTGLGLS IARQIIIQKH
GGKLEVNSEP GRGSEFIINI PIE
|
|---|
| |