| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2112 |
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| Symbol | dapF |
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| ID | 3680370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2613173 |
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| End bp | 2614030 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637717457 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_322629 |
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| Protein GI | 75908333 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.593544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTTCT ATAAATATCA TGCTCTTGGT AACGATTATT TAGTTATCAA TCCTCAGGAT
TTAAAATTTA GCCTAACGCC TGAAAAAATT AAAATAATTT GCCATCGAAA TTTTGGTATT
GGATCTGATG GTATTTTGTT GGGGCCTTTA GCATCAACAA AAGCACAATT CGCCTTACGC
ATTTTCAACC CCGACGGAAG TGAGGCAGAA AAAAGCGGTA ATGGACTGCG GATTTTCTCC
CGTTATTTAT GGGATATGGG ACTAGTTGAT GAAAATCCAT TCTCAATTGA AACTGTAGGT
GGACTAGTGG AATCTGCGAT CAAAGATGCA GGTAAAACAG TCCAAGTAGA GATGGGGAAA
GTCAGCTTTT GGAGTCGTGA TATTCCAGTT GTTGGCGATG ACAGAGAAGT AATTCAAGAA
AAAATATTTC TTGATGAAGG CATTTTTACA TTTTGTGCAG CCACAATAGG TAATCCACAC
TGTGTAATTC TTTTAGATGA CATCAATGCC GATGTTGCCA GAAATTTTGG CCCAATATTT
GAAGTTTTTC CTCTTTTCCC CAATCGCACT AATGTGCAGT TTATGAAGGT TTTAGATAGA
AGCACTATTC AAATTGAAAT TTGGGAAAGA GGAGCAGGTT ACACTTTAGC TTCAGGTAGT
AGTAGTAGCG CGGCGGCGGC TACTGCACAT AAACTTGGTT TGTGTGACTC TGAAATTATT
GTCCAAATGC CTGGGGGAGA CATTTTAATT CAAATTAAAG ATGACTTTCA TATCTCTATG
ACTGGTTTTG TCACAAAAGT TGCCCAAGGA GAATTGTCAA CAGAAATATT TGCCATAGAA
ACTGTCAGTA ATATCTGA
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| Protein sequence | MKFYKYHALG NDYLVINPQD LKFSLTPEKI KIICHRNFGI GSDGILLGPL ASTKAQFALR
IFNPDGSEAE KSGNGLRIFS RYLWDMGLVD ENPFSIETVG GLVESAIKDA GKTVQVEMGK
VSFWSRDIPV VGDDREVIQE KIFLDEGIFT FCAATIGNPH CVILLDDINA DVARNFGPIF
EVFPLFPNRT NVQFMKVLDR STIQIEIWER GAGYTLASGS SSSAAAATAH KLGLCDSEII
VQMPGGDILI QIKDDFHISM TGFVTKVAQG ELSTEIFAIE TVSNI
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