Gene Ava_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2054 
Symbol 
ID3680703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2542940 
End bp2543239 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content43% 
IMG OID637717399 
Product50S ribosomal protein L25 
Protein accessionYP_322571 
Protein GI75908275 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGA CAGTCGAAAC TAAAAAACGC CCAGAAGGCA GCAAGCCTAA AGCTTTGCGC 
CGCTCTGGAT TTATCCCCGC TAATTTGTAC GGACACAACG GTAGAGAATC AATTTCTTTG
GTAGTTGATG CCAAAGTAGT TGAAAGATTA CTCAAAGCAG CTGCTGTTAA AAAAACAGAA
ATCGAACTCA ATATTCCTGA ACTGGAATGG ACTGGTAAAA CCGTTCTTCA AGAAGTTCAG
ATACATCCAG CCAAAGGTAC ACCGTATCAC ATCAGCTTCC TTGCCACTGC CAAAGGCTAA
 
Protein sequence
MALTVETKKR PEGSKPKALR RSGFIPANLY GHNGRESISL VVDAKVVERL LKAAAVKKTE 
IELNIPELEW TGKTVLQEVQ IHPAKGTPYH ISFLATAKG