Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2042 |
Symbol | |
ID | 3680983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2527131 |
End bp | 2527931 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637717387 |
Product | pathogenesis related protein-like |
Protein accession | YP_322559 |
Protein GI | 75908263 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0756514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.351726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAA TTGACATCGA AAAACTTCAT CTTTGGGTAC AAGATAGAGA CACTGTATTA AAGTACAGCA CTCATGTTGA CTGGCGTTAT GGTGAAAAAC CAGATTATAC CCATTCTAAT GAAAAACTTG CCCAGGAAAG TACACGTAAT CACCCATCCA ATTCACTGGA AACACTGGTA CAAAATTTGG TGCGTACCTT TGATATTGAA GCTAACTTTA AAACAAATCC TGCTCAGTGG CTTTCTGTTG TTCCCGACCA ATTTCGCATG AGTACCAATG GAGGTTCTCG CCATACCATC ACAGACTTGA TTAATTCAGG TACTTATAAA TTGATGATTG GCAATACCAA AAATTACAAA GCCACTGAGG AAAACTTTGA AACTTCCACT GGTCTATTTC ATACAGCTTT TCCTAACGGC TTTTTGTGGG AAGTTCTAGA AGTTTATTCA GGGCCACCGG AGATTGTTTT TAAATGGCGA CACTGGGGGG AATTTAAAGG TGAATTTAAA GGCTATGCAC CCACAGACGA GATGATAGAA GTCATTGGTA CAAGCGTTGT GCGCGTCACA GATGATTTAA AAATCCTTTC TTTGGAACAC TATTATGACA ATACCCAGTT CCTAGCAAAG CTGACATCTG GTGGTAAATT ACTAAAAACT CCCCAAAATC AGCAAAAAAA ATCTAATTCT CTCTGGCGGA GGTTTTGGAA TTTCATCCGA AAACTTTGGG GAAAAAGGGA GAAATCAGCA TCAGCAAATT TACAAACTAG CCGTTGTCCT TTTGCTGCTG TTATGAAGTA A
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Protein sequence | MSQIDIEKLH LWVQDRDTVL KYSTHVDWRY GEKPDYTHSN EKLAQESTRN HPSNSLETLV QNLVRTFDIE ANFKTNPAQW LSVVPDQFRM STNGGSRHTI TDLINSGTYK LMIGNTKNYK ATEENFETST GLFHTAFPNG FLWEVLEVYS GPPEIVFKWR HWGEFKGEFK GYAPTDEMIE VIGTSVVRVT DDLKILSLEH YYDNTQFLAK LTSGGKLLKT PQNQQKKSNS LWRRFWNFIR KLWGKREKSA SANLQTSRCP FAAVMK
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