Gene Ava_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2042 
Symbol 
ID3680983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2527131 
End bp2527931 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content39% 
IMG OID637717387 
Productpathogenesis related protein-like 
Protein accessionYP_322559 
Protein GI75908263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0756514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.351726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAA TTGACATCGA AAAACTTCAT CTTTGGGTAC AAGATAGAGA CACTGTATTA 
AAGTACAGCA CTCATGTTGA CTGGCGTTAT GGTGAAAAAC CAGATTATAC CCATTCTAAT
GAAAAACTTG CCCAGGAAAG TACACGTAAT CACCCATCCA ATTCACTGGA AACACTGGTA
CAAAATTTGG TGCGTACCTT TGATATTGAA GCTAACTTTA AAACAAATCC TGCTCAGTGG
CTTTCTGTTG TTCCCGACCA ATTTCGCATG AGTACCAATG GAGGTTCTCG CCATACCATC
ACAGACTTGA TTAATTCAGG TACTTATAAA TTGATGATTG GCAATACCAA AAATTACAAA
GCCACTGAGG AAAACTTTGA AACTTCCACT GGTCTATTTC ATACAGCTTT TCCTAACGGC
TTTTTGTGGG AAGTTCTAGA AGTTTATTCA GGGCCACCGG AGATTGTTTT TAAATGGCGA
CACTGGGGGG AATTTAAAGG TGAATTTAAA GGCTATGCAC CCACAGACGA GATGATAGAA
GTCATTGGTA CAAGCGTTGT GCGCGTCACA GATGATTTAA AAATCCTTTC TTTGGAACAC
TATTATGACA ATACCCAGTT CCTAGCAAAG CTGACATCTG GTGGTAAATT ACTAAAAACT
CCCCAAAATC AGCAAAAAAA ATCTAATTCT CTCTGGCGGA GGTTTTGGAA TTTCATCCGA
AAACTTTGGG GAAAAAGGGA GAAATCAGCA TCAGCAAATT TACAAACTAG CCGTTGTCCT
TTTGCTGCTG TTATGAAGTA A
 
Protein sequence
MSQIDIEKLH LWVQDRDTVL KYSTHVDWRY GEKPDYTHSN EKLAQESTRN HPSNSLETLV 
QNLVRTFDIE ANFKTNPAQW LSVVPDQFRM STNGGSRHTI TDLINSGTYK LMIGNTKNYK
ATEENFETST GLFHTAFPNG FLWEVLEVYS GPPEIVFKWR HWGEFKGEFK GYAPTDEMIE
VIGTSVVRVT DDLKILSLEH YYDNTQFLAK LTSGGKLLKT PQNQQKKSNS LWRRFWNFIR
KLWGKREKSA SANLQTSRCP FAAVMK