| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2017 |
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| Symbol | |
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| ID | 3681289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2496824 |
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| End bp | 2498290 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637717361 |
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| Product | Alpha amylase, catalytic region |
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| Protein accession | YP_322534 |
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| Protein GI | 75908238 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00107336 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATTC AAACACCAGA CTGGGTGAAA AACGCTGTAT TCTACCAAAT CTTTCCAGAC
CGTTTTGCTA TAAGTAAACA GTCCCGGAAG CGGCTGTTGC GTGATGTGCG TTGGGAAGAC
TGGGACGCAA TGCCAACACT GCAAGGATAC AAAGGCGGTG ATTTATGGGG CATTATGGAG
CAGTTGGACT ATATTCAAGA TTTGGGCATC GATGCCATCT ACTTTACGCC CATCTTTCAG
TCTGCCAGCA ATCACCGCTA TCATACCCAC GACTATTATC AAGTAGACCC GATGTTGGGT
GGGAATGCCG CTTTTAAGGA GTTACTAGAC GCGGCCCACG AACGCAATAT TAAAGTTGTC
CTCGATGGCG TATTTAATCA TTCCAGTCGA GGATTTTTCT TTTTCCATGA CGTTTTGGAA
AATGGCCCCC ATTCTCCTTG GGTAAATTGG TTCAAAATAG AAGGCTGGCC TCTTGCACCA
TATACAGGTG AGTTACCGGC AAATTACGTA GGTTGGGCTG ATAATCGTGC CTTGCCCGTA
TTTAATCACG ATAACCCAGA CGTACGGGAA TATATTATGG AAATTGCCGA ATATTGGCTT
AAATTCGGCA TCGACGGCTG GCGATTGGAT GTACCATTTG AAATTAAAAC TCCTGGCTTT
TGGCAAGAAT TCCGCGATCG CGTTAAAGCC ATTAACCCCG AAGCTTATAT TGTGGGGGAA
GTGTGGGGAG ATTCCCGTGA GTGGCTAGAT GGGACGCAAT TCGACGGCGT GATGAATTAC
TTATTTGCCG GGCCGACCAT TGCTTTTACC GCAGGCGATC GCGTAGTCTT AGAACAAGTC
CAAAGCCGCG ACTATCAACC GTATCCGCCC CTATTCGCCG CCGAATACGC CACCAAAATT
CAGGAAGTAC TGCAACTTTA TCCTTGGGAA ATTCAACTTA CCCAACTCAA CTTATTAGCC
AGTCACGATA CAGCCAGACT AATGACCATT GCTGGCGGTG ATCAAGCCAG TATAGAATTA
GCTACCCTAT TACTACTTAC CTTTCCTGGT GCGCCGAGTA TCTACTACGG TGATGAAGTG
GGTTTACCGG GAGGTATAGA CCCCGATTCT CGCCGGGGTT TTCCCTTAGA AGCCAACTGG
GATAGAGAAA TTTACCAGAC TCACCGTCAA TTAATAGCCT TACGCCACGC TTACCCAGCC
TTACGCACAG GTGAGTATCA AGTTATTTGG GCGCAAGGTG CATTGTATGT ATTTGCCCGT
ACTTTAGGTA AGGAAGAACT GATTATTGCT GTAAATGTAG GTACAGCACC AGCCCAGGCT
AATGTAGATG TTGCTAGTTT GCAGACTCAG CCAGATAAAA TCCTGTATGG CGAAGCAGAA
TTTAGCTGGC ACAATACAGA AGAAACAAAA CAACTTTCCT TAAATCTCCC CCCACGTAGT
GGCTGCATTT TGGGTTTAGG GGATTAG
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| Protein sequence | MQIQTPDWVK NAVFYQIFPD RFAISKQSRK RLLRDVRWED WDAMPTLQGY KGGDLWGIME
QLDYIQDLGI DAIYFTPIFQ SASNHRYHTH DYYQVDPMLG GNAAFKELLD AAHERNIKVV
LDGVFNHSSR GFFFFHDVLE NGPHSPWVNW FKIEGWPLAP YTGELPANYV GWADNRALPV
FNHDNPDVRE YIMEIAEYWL KFGIDGWRLD VPFEIKTPGF WQEFRDRVKA INPEAYIVGE
VWGDSREWLD GTQFDGVMNY LFAGPTIAFT AGDRVVLEQV QSRDYQPYPP LFAAEYATKI
QEVLQLYPWE IQLTQLNLLA SHDTARLMTI AGGDQASIEL ATLLLLTFPG APSIYYGDEV
GLPGGIDPDS RRGFPLEANW DREIYQTHRQ LIALRHAYPA LRTGEYQVIW AQGALYVFAR
TLGKEELIIA VNVGTAPAQA NVDVASLQTQ PDKILYGEAE FSWHNTEETK QLSLNLPPRS
GCILGLGD
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