| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1989 |
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| Symbol | trmE |
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| ID | 3681415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2469195 |
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| End bp | 2470586 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637717330 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_322506 |
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| Protein GI | 75908210 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.858955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCAAC TTTTGGCTAT TACTGGAACT ATTGCAGCGA TCGCTACTGC TATTGTCCCT
CAACAAGGTA GCGTCGGTAT CGTGCGGGTG TCTGGTTCCC AGGCAATAGC GATCGCCCAA
ACTCTGTTTC ATGCACCAGG TAAACAAGTT TGGGAAAGTC ACCGGATTCT TTACGGTTAC
ATCCGCCATC CCCAGACGCG ACAAATTGTC GATGAAGCAC TGTTACTGCT CATGAAAGCC
CCTCGTTCTT ACACCCGCGA AGATGTGGTG GAGTTCCATT GCCACGGCGG AATTATGGCA
GTGCAGCAGG TGTTGCAATT GTGCCTGGAA GGCGGCGCTA GACTCGCTCA ACCGGGGGAA
TTTACCCTCA GAGCCTTTTT GAATGGCAGA CTAGATTTAA CCCAAGCTGA GAGCATTGCT
GATTTGGTAG GAGCGCGATC GCCCCAAGCT GCTCAAACGG CTTTAGCTGG TTTACAAGGC
AAACTCGCTC ATCCCATCCG CCAGTTACGC GCTAACTGTT TGGATATTCT GGCAGAAATT
GAAGCCCGGA TTGATTTTGA GGAAGATTTA CCCCCGTTGG ATGATGAAAA AATAATATCA
GATATTGAAA ACATTGCCGC AGAAATATCG CAACTACTGG CAACTAAAGA CAAAGGTGAA
CTGTTGCGGA CAGGCTTAAA AGTGGCGATA GTCGGTCGTC CGAATGTAGG TAAATCCAGC
TTATTGAATG CTTGGAGCCA GAGCGATCGC GCCATTGTCA CCGACTTACC CGGCACAACC
CGCGACGTTG TGGAATCGCA GTTAGTTGTG GGCGGTATTC CTGTACAGGT GCTAGATACA
GCAGGCATTC GGGAGACTAG CGACCAAGTA GAAAAAATAG GGGTAGAGCG ATCGCGCCAA
GCCGCCAACA CCGCCGATTT AGTCTTGTTA ACCATCGATG CAGCCACAGG TTGGACGACT
GGCGACCAAG AAATTTATGA ACAAGTAAAA CACCGTCCGT TAATTCTAGT AATGAATAAA
ATTGATTTAG TAGACAAAAA ATTAATTACA TCCTTAGAAT ATCCTAAAAA TATTACTCAA
ATTGTCCACA CAGCCGCAGC CCAAAAACAA GGAATTGATG CGCTAGAAAC TGCAATTTTA
GAGATAGTTC AAACTGGAAA AGTGAAAGCG GCTGATATGG ATTTAGCCAT TAATCAAAGA
CAAGCCGCAG CCCTCACCCA GGCGAAAATT TCTCTAGAAC AAGTGCAAGC CACCATCACC
CAGCAGCTAC CCCTAGATTT TTGGACAATT GACTTACGCG GTGCAATTCA AGCACTAGGA
GAAATCACCG GGGAAGAGGT AACGGAGTCA GTGCTTGATA GGATTTTTAG TAGGTTTTGT
ATAGGAAAGT AG
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| Protein sequence | MTQLLAITGT IAAIATAIVP QQGSVGIVRV SGSQAIAIAQ TLFHAPGKQV WESHRILYGY
IRHPQTRQIV DEALLLLMKA PRSYTREDVV EFHCHGGIMA VQQVLQLCLE GGARLAQPGE
FTLRAFLNGR LDLTQAESIA DLVGARSPQA AQTALAGLQG KLAHPIRQLR ANCLDILAEI
EARIDFEEDL PPLDDEKIIS DIENIAAEIS QLLATKDKGE LLRTGLKVAI VGRPNVGKSS
LLNAWSQSDR AIVTDLPGTT RDVVESQLVV GGIPVQVLDT AGIRETSDQV EKIGVERSRQ
AANTADLVLL TIDAATGWTT GDQEIYEQVK HRPLILVMNK IDLVDKKLIT SLEYPKNITQ
IVHTAAAQKQ GIDALETAIL EIVQTGKVKA ADMDLAINQR QAAALTQAKI SLEQVQATIT
QQLPLDFWTI DLRGAIQALG EITGEEVTES VLDRIFSRFC IGK
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