Gene Ava_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1953 
Symbol 
ID3681613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2427844 
End bp2428494 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content44% 
IMG OID637717294 
Producthydrogenase accessory protein 
Protein accessionYP_322470 
Protein GI75908174 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2370] Hydrogenase/urease accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.776379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.376747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACTA CATCCATACC TACTGCTGTC AGGAAGTTAC AGCATCGTCA CCTGGGAGCG 
ATCGCCGCTT TGATACTAAT TAGTTTGTTA AGCTCTGTAA GTGGATTATC TCTGCAATAT
CAGATAACCA ATAGCTGGGA TGGTTTTTTA TGGGGTGTGG CTGATCCGGT GCTGCACCTC
GACAGTTTAG CCAGGATATT AGGCATTGGT TTAATCTCAA CAGGCATTGT TCATGGTTCA
TTCGTCACCA TGTCTTTTGT CTTAGCATCT GTACTGGGCG GACTTACACA TTTATCGACG
TTCCATTTAC CAGGTGCAGA GATAGCGATC GCTATTTTTA CTATTGGCTT TGGTGCTATC
TTAGTGATGC CCCATAAACC TAACTGGCTG GTTGTAGTGA TCTTAGGTGC GATCGCTGGT
TTGTTGCAAG GCTACGTTTC TGGACAAGTT ACCGACGGGA TTGATTTCAT CTCCTTGCTT
ACCTACACCG CAGGCTTCGG TTTAACTCAG TATGCAATCG CCACTAGTAC CAGACGACTG
GTTAAGGATA GCTTATACAC AATCGTCCGT TTTGTAGGTT TTGCTTTTAT GGCGATCGGT
TTTGTATTCT GCGGTAACTT ACTCAATTTC TTAGGTACTG CTAATTTTTG A
 
Protein sequence
MLTTSIPTAV RKLQHRHLGA IAALILISLL SSVSGLSLQY QITNSWDGFL WGVADPVLHL 
DSLARILGIG LISTGIVHGS FVTMSFVLAS VLGGLTHLST FHLPGAEIAI AIFTIGFGAI
LVMPHKPNWL VVVILGAIAG LLQGYVSGQV TDGIDFISLL TYTAGFGLTQ YAIATSTRRL
VKDSLYTIVR FVGFAFMAIG FVFCGNLLNF LGTANF