Gene Ava_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1932 
Symbol 
ID3681651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2400940 
End bp2402232 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content40% 
IMG OID637717273 
Producthypothetical protein 
Protein accessionYP_322449 
Protein GI75908153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.217801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGGC AGATTTGGTC ATTACAGAAA AAATTACTGA TTAGTACAGT GATTACGGTA 
TCTTGGATAA CTCCCGTTTT AGCTCAATCG GATCCGCTTC TGACTCGTGC CGAAGTTTAC
AAACTTACTA AGATTGTGGA ACTGCTGCTA CACAACCAAA CTCAACGCCC AGCACGCCCC
AAGGATGTTG TCGTTCCTAA AGATGCAGTA AAAACGGGTG TCAGTTCAGA AGCGCAACTA
TTCTTTAATG ATCAATCCCT CATTCGGGTA GACCAAAGTA GTATCTTTCG CTTTGAACCA
GGGTTACGTC GCTTTAAGTT GCGAAATCTG ATTGCCCTGA ATGAAATGAT ATTTAAATTG
GAAAGTGGCA CAGCTTTAAT TTTGAGTCCA CCAGGAAGTG TCGGAACAGC AATAGAAACA
CCAGAAAGTC AGATTACTAT TTTTGCAGCA AATCCAGCAA TTACCTCTAG TGGGCAGAAC
ACTATTGCCA AACTTAACCA CTCTGTTATT ACTAATTCTA AAAATACAAA GTTAACCCAA
AATAATGATT TATATGCACC TGCACAAAAA GCTAGTGCAG TGATGGTAAT ACATAATCAA
GAAAGCAAGA AAACACAAGT TTTTGCCCTA ACTGATGGAG ATATTAAAAT TACAGATCAA
AGAGGACGAA AAATTGTATC TTTGCTTGGT GGTCAAACGG TAGCAGTGAC AAATGGTGTA
GTGGGAAATC CTCAAGAATT TGACTTACCA GCCTTTTATA AAAGTATTGC CCTTGCCTCT
GGACTAGGTG CGGGACAAGA AAATTTAGTG GCTCAAGAAA CTACTCCGGT GCAAGAAACA
ATCAACGCTG TACGCATAGA AACATTAGCC GCTTTGAGAA GACAGTCCGA CAGGTTTAGA
GGATTTACCA GGACATTTTT AGCTGATGCA CTCAATGGTA CAGAAGGTGA TTTAAATCCT
CGTCCATCAG TTTCCGTCAG GATTACAAAC CCACAAGTTG TTACAGGTAC TTTTTACCGA
AGACAGGGTA ATAATGCTGT GTTTATTCCT GATAATAATC CCAACTCTCC AGTTGATATT
TCTGTAGATT TTGATCAGCG AACAATTGAT ATTGGTGGCA ATACAGGCGT GTCTAATAGG
GCGGGATTAA GTGGTAATAA TGCTAGCGGT TCCGTAATTA ATGCTAACGG TCAAATAACT
CAAATAGAAG TTTTTGCTGT GAATGGAGAA AGCCCACAAG AAGGTGTTCC TTATCGTGGT
AGTTTGACAA CGGGTATAGC CCGCGATCGC TAA
 
Protein sequence
MRGQIWSLQK KLLISTVITV SWITPVLAQS DPLLTRAEVY KLTKIVELLL HNQTQRPARP 
KDVVVPKDAV KTGVSSEAQL FFNDQSLIRV DQSSIFRFEP GLRRFKLRNL IALNEMIFKL
ESGTALILSP PGSVGTAIET PESQITIFAA NPAITSSGQN TIAKLNHSVI TNSKNTKLTQ
NNDLYAPAQK ASAVMVIHNQ ESKKTQVFAL TDGDIKITDQ RGRKIVSLLG GQTVAVTNGV
VGNPQEFDLP AFYKSIALAS GLGAGQENLV AQETTPVQET INAVRIETLA ALRRQSDRFR
GFTRTFLADA LNGTEGDLNP RPSVSVRITN PQVVTGTFYR RQGNNAVFIP DNNPNSPVDI
SVDFDQRTID IGGNTGVSNR AGLSGNNASG SVINANGQIT QIEVFAVNGE SPQEGVPYRG
SLTTGIARDR