Gene Ava_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1879 
Symbol 
ID3681792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2331361 
End bp2332008 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content42% 
IMG OID637717220 
Producthypothetical protein 
Protein accessionYP_322396 
Protein GI75908100 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.538424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC CTGATCCCAA TCGAGTTTTG CGGCGCTTAC CCTTTGTAGT AGGTGGGTTA 
GGCGCTATAC TTTTGCTGAT TAACCGTTTA TTGACACCAG AATTGACAAA CTCTCAAGCC
CGTGGTGATG TGCTGGGGGT GATTTTGAGT GCTGTACTAA TTTTAACGGG TTTAATTTGG
CAGCAGGTAC AGCCGCGATC GCCTGATTCT GTAGAACTCA TTGGCGATGA AGGTTTTGTT
TTATCAGCAG ATTTACCAGA AGCCGTGAAA ACAGAACTAG CCTGGGCATC TCATTTATTG
TTGACTAACA CAGTAACGCG ATCGCTGGTG GTTTACTATC AAGGCAAAGT TTTGTTACGT
CGCGGTATTC TGGGATCAAA GGCAGAAGTC ACACCAGGCG CGATTGTGAA GCGAGTTTTG
GAAAAACAAC AGCCTGTTTA TTTAGTGGCT TTAAATGTTT ACCCAGGACG AATTGAATTT
GATTATTTGC CAGAAAATAC CCAAGGTGTA ATTTGTCAAC CAATTGGTAA TGAAGGTGTA
TTAATTTTAG GGGCCAATGC TCCTAGAAGT TACACTAAAC AAGATGAAAA CTGGATAGCA
GGAATTGCTG ATAAGTTAGC AGTGACACTC AAAAATAGTC ATGGATAA
 
Protein sequence
MTKPDPNRVL RRLPFVVGGL GAILLLINRL LTPELTNSQA RGDVLGVILS AVLILTGLIW 
QQVQPRSPDS VELIGDEGFV LSADLPEAVK TELAWASHLL LTNTVTRSLV VYYQGKVLLR
RGILGSKAEV TPGAIVKRVL EKQQPVYLVA LNVYPGRIEF DYLPENTQGV ICQPIGNEGV
LILGANAPRS YTKQDENWIA GIADKLAVTL KNSHG