| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1844 |
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| Symbol | |
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| ID | 3681835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2297176 |
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| End bp | 2297952 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637717184 |
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| Product | RNA polymerase sigma factor SigF |
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| Protein accession | YP_322361 |
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| Protein GI | 75908065 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTACAA CAGCTACCAA CGAATTGAAA TACGAAATTT GGCAGTTGTT ACGAGAATAT
CAGCAATCTC GGTCAGAAAC TGTTCGTAAT CAACTAGTAA AACTGAATCT TGGATTAGTG
AGGAAAGAAG CTCACTACTG GATGAATCAA TGCCGTGAAA ACTATGATGA TTTAGTTCAG
GTTGGTTGTT TGGGTTTAAT CAGAGCGATT GAAAGATTTG AAATTGCCAA AGGCCACGCT
TTTAGCTCCT TTGCTATTCC TTATATTCGT GGCGAAATTC AGCACTACCT CCGTGATAAA
GGTGTAACAG TAAGAATTCC TCGTCGCTAC TTGGCTATAC AACAGCGAGC GATTGGGGTT
TCGCGTTCTT TGCGGGAACA ATACAACCGC CAACCAACTG ACTCAGAATT AGCAACAGCA
CTGGATATTT CTCCAGATGA GTGGCAGGAA ATCAAATTAG CATGGGTAAA TCGCGCTCCT
TTGAGTTTAG ATGTACCAGT TCAAGATGGT GAAGAAGGAG CAACTAGCCT GGGAGAATTG
GTTCCTGATC ATCATTACCG CAGTTTTCAG TTGGCGCAAG AAGACCAAAT TCGCTTACAA
CAAGCATTGT TCCAGTTAGA GCAACGCACT CGTGAAGTTT TAGAGTGTGT GTTTTTACAA
GACTTGACGC AGAAACAGGT GGCAGAACAC TTAGGAATTA GTGTCGTCAC AGTTTCCAGG
AGAGTCAAAA AAGGGTTGGA CTTGTTAAAG CATCTTATGT GTGTGGCAGA CGATTAA
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| Protein sequence | MPTTATNELK YEIWQLLREY QQSRSETVRN QLVKLNLGLV RKEAHYWMNQ CRENYDDLVQ
VGCLGLIRAI ERFEIAKGHA FSSFAIPYIR GEIQHYLRDK GVTVRIPRRY LAIQQRAIGV
SRSLREQYNR QPTDSELATA LDISPDEWQE IKLAWVNRAP LSLDVPVQDG EEGATSLGEL
VPDHHYRSFQ LAQEDQIRLQ QALFQLEQRT REVLECVFLQ DLTQKQVAEH LGISVVTVSR
RVKKGLDLLK HLMCVADD
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