Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1789 |
Symbol | |
ID | 3682073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2233368 |
End bp | 2234327 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637717129 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_322306 |
Protein GI | 75908010 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAAAA AAAGAATTTT TGTGACCGGT GCTAGTGGAT GTATAGGTCA CTATATTAGC GAAACCTTAA TTCAAGAAAC AGATTACGAA CTATATTTAC TAGTCAGAAA CCCCAGTAAA TTACAAGTTG ATACTCAGAT TCGTCCAGGT ATCACTGTCT TACAGGGTGA TATGCAGAAT ATTAGTCAAT TTGCTGATTT ATTATCCACA ATTGATATAG CAGTCCTCAC CGCAACCGCT TGGGGTGGTG AGCAAACCTT TGATATTAAT GTATCTAAAA CTATAGAGTT ACTTAACCTA TTAGATCCCG ACCGTTGTCA ACAAGTTATT TATTTTTCTA CAGCCAGCGT TTTAGATAGT CACAATCAAC CACTTAAAGA AGCTGGGGAA ATTGGCACAG ATTATATCCG GTCTAAATAT GAATGCTTAC ATAAAATATC AGAATTAGGT ATTGCCTCTA AAATCACCAC AGTTTTTCCC ACATTAGTTT TAGGTGGTGA TAGCAAAAAA CCTTACTCCC ATCTCACATC AGGTATCCCC GAAGTTACCA AGTATGTTAA TTTAATCCGC TTTTTACAAG CCGATGGTAG TTTCCACTTT ATCCACGGCA AAGATATTGC CAGCGTAGTT AAATATTTAA TAGTCAATCC TCCTCAAGAA AATACATCAC GTAGATTAGT ATTAGGACAA AAGCGTTTAA CTGCTAACCA AGCAATAGAA GAAGTTTGCA CCTATCTAGG CAAAAAGATT TCCTTCCGTA TTCCCCTATC TTTGTCATTG GCAAATCTCA TTATTGCCGT CTTTCGCATT CAGATGGCAG ACTGGGATAG ATTTTGTATG AACTATCGCC ATTTCACCTA TGACACAGTG ATTAATCCTG ATAGTTTTGG CTTGCCAAAT TACTGTGCAA CGATGAGTGA TGTCTTAAAA ATTAGCGGTG TTGATAGTTC TCACCAGTAA
|
Protein sequence | MTKKRIFVTG ASGCIGHYIS ETLIQETDYE LYLLVRNPSK LQVDTQIRPG ITVLQGDMQN ISQFADLLST IDIAVLTATA WGGEQTFDIN VSKTIELLNL LDPDRCQQVI YFSTASVLDS HNQPLKEAGE IGTDYIRSKY ECLHKISELG IASKITTVFP TLVLGGDSKK PYSHLTSGIP EVTKYVNLIR FLQADGSFHF IHGKDIASVV KYLIVNPPQE NTSRRLVLGQ KRLTANQAIE EVCTYLGKKI SFRIPLSLSL ANLIIAVFRI QMADWDRFCM NYRHFTYDTV INPDSFGLPN YCATMSDVLK ISGVDSSHQ
|
| |