Gene Ava_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1789 
Symbol 
ID3682073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2233368 
End bp2234327 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content37% 
IMG OID637717129 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_322306 
Protein GI75908010 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAA AAAGAATTTT TGTGACCGGT GCTAGTGGAT GTATAGGTCA CTATATTAGC 
GAAACCTTAA TTCAAGAAAC AGATTACGAA CTATATTTAC TAGTCAGAAA CCCCAGTAAA
TTACAAGTTG ATACTCAGAT TCGTCCAGGT ATCACTGTCT TACAGGGTGA TATGCAGAAT
ATTAGTCAAT TTGCTGATTT ATTATCCACA ATTGATATAG CAGTCCTCAC CGCAACCGCT
TGGGGTGGTG AGCAAACCTT TGATATTAAT GTATCTAAAA CTATAGAGTT ACTTAACCTA
TTAGATCCCG ACCGTTGTCA ACAAGTTATT TATTTTTCTA CAGCCAGCGT TTTAGATAGT
CACAATCAAC CACTTAAAGA AGCTGGGGAA ATTGGCACAG ATTATATCCG GTCTAAATAT
GAATGCTTAC ATAAAATATC AGAATTAGGT ATTGCCTCTA AAATCACCAC AGTTTTTCCC
ACATTAGTTT TAGGTGGTGA TAGCAAAAAA CCTTACTCCC ATCTCACATC AGGTATCCCC
GAAGTTACCA AGTATGTTAA TTTAATCCGC TTTTTACAAG CCGATGGTAG TTTCCACTTT
ATCCACGGCA AAGATATTGC CAGCGTAGTT AAATATTTAA TAGTCAATCC TCCTCAAGAA
AATACATCAC GTAGATTAGT ATTAGGACAA AAGCGTTTAA CTGCTAACCA AGCAATAGAA
GAAGTTTGCA CCTATCTAGG CAAAAAGATT TCCTTCCGTA TTCCCCTATC TTTGTCATTG
GCAAATCTCA TTATTGCCGT CTTTCGCATT CAGATGGCAG ACTGGGATAG ATTTTGTATG
AACTATCGCC ATTTCACCTA TGACACAGTG ATTAATCCTG ATAGTTTTGG CTTGCCAAAT
TACTGTGCAA CGATGAGTGA TGTCTTAAAA ATTAGCGGTG TTGATAGTTC TCACCAGTAA
 
Protein sequence
MTKKRIFVTG ASGCIGHYIS ETLIQETDYE LYLLVRNPSK LQVDTQIRPG ITVLQGDMQN 
ISQFADLLST IDIAVLTATA WGGEQTFDIN VSKTIELLNL LDPDRCQQVI YFSTASVLDS
HNQPLKEAGE IGTDYIRSKY ECLHKISELG IASKITTVFP TLVLGGDSKK PYSHLTSGIP
EVTKYVNLIR FLQADGSFHF IHGKDIASVV KYLIVNPPQE NTSRRLVLGQ KRLTANQAIE
EVCTYLGKKI SFRIPLSLSL ANLIIAVFRI QMADWDRFCM NYRHFTYDTV INPDSFGLPN
YCATMSDVLK ISGVDSSHQ