Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1782 |
Symbol | |
ID | 3682066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2222788 |
End bp | 2224659 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637717122 |
Product | hypothetical protein |
Protein accession | YP_322299 |
Protein GI | 75908003 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.188313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.661033 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGGTT ACACTGTGCA TCTGTATTCA ACAAACGAAC ACCCTTCTTT TTCGGTTCTC ACCGATACAG AAAATATTAT AGAAGACCAG CAGGAAGGCT CTATGAGAGT AGCAGTCCAG CAGGAAGATT TACAGCTATT AAGCAGAACT TTGCAAGAAC AATTTCTTGC CGAAGTTCCC TCTGGTGAAT TTTTCCAGAT TAAGTGTGCA GTCAACAAAG ATGAGTTAAT GATCCTAGCT CAACATCCAG TTAGCGTAAA AGTTGATACA CAAGAAATTT TTGCAGTACT TGAGGAAGCA CTGCAATCAT TACCACCTTA TCAGGATCAG CCAGTCCAAT GTTTTCTGAG AATTGTCGGG GAAAAACTTC CTTACGCTAA ACGTTCCCTG ACTATGAAGG GATACCGACA GGTGGAAAGC CCTGACATTC CACAAGATAA TGAAGATCAA GAAGACGAGG ATGCAGCATC TTTTTCATCC TTAGCATTAC CTTTGAGTTA TTCAACCACA ACAGATGCCG TCGAAGACGA AGAAGAAGTA TTTGACCCCC TAGCTGGTAC ACCAGATTTA TTAACAAACT CGTCTCAGCG TCCATTGAAA AAGATTTTGT TAGGGACTGT GGTGGGAATT TCTCTCTTAG GTAGTGGTGG TGTTTACCTA GTGACTCGTC CTTGTGTGAT GTCTGTGTGT CAAGAATTCC AAACTGCCCA GCAACTCAAT ACTCAATTTC GCCAATTGAT TAGTCGTGCT AGGTCAGAAA AGGACTTGAC AACATTACAA CAACAGTTAG AAACAACTAG CACCGCCTTA GGTGTAATTC CTGCTTGGTC ATCTTATTAC CAACAAGCAG CAGAACTCAA AACTAATCTG TCTGGACGTT CCGAAAAAAT TAGCCAAGTC AACAAAGCTT TGCAGGCGGC TTCAGTTGCA GAGCAAAAAA TGCAAACTCC TGCTACTAGT CAAGGCGAAT TACAAGCTAG ACAACAACTT TGGCGACAAG CGATAACGCC CCTGGAAGCA ATCAGCCCTA ATCATGAACT ATATGGACTG ATACAGCCAA AATTGTTGAA ATATCGGATT CATTTGCAAA CTATCAATCA GCAATTACTC GCTCAAGAAA AGTGGGTGAA AAAGTTAGCA GATGCGAAAG GCGTGGCTAG TGTAGCCAAC AAGTGGGAAA CAACAGCCAA ATCTTTGAAA GATTGGCAAA AGGTGCAGTC TACTTGGCAA GTAGTAATTA ATGCCTTGAA TGTTATACCT CCTTCGAGTC CAGCATCTCA AGAGGCACAA CAACTATTAC TAGAATATAA ACCTAAACTT GCAAGAGCGC GCGATCGCGT TACCATCGAA CAACTAGCAG CTAAAAGCTA CCAACAAATT CTTGTTATAG CCAGCCAAGC TAAAGCTTAT GAGCAAAAAC AAGAATGGCA AGCAGCTGTT ATTTACTGGC AACAAGCTTT ACAGGCAGCT AAACAAATTT CTAACAATAG CTTGTATTAC ACTCAAGCTC AGAGTTTAAT CACACCATAT TCAGCTTCCC TGCAACAGGC GCAAGAAAAA CTAATTTTAA ATAATAGTTG GCAGCAAACC CGTGCTGACT TAAATAAAAC TTGCTCTAGT GAAATTAGGA TTTGTAACTT TACCGTAGAC GATAAAGGAA TCATCGTCAA AATTACCCCT GAATATGAAC AGGTACTACA AAGTACTGTT TCCAAGAACA ACACTCAAGA TTCTGAGGCT GCAATTGGCG TTGCTAATCA TTGGCAAACC TTACAAGAAG CTTTAACAGT AATTAGCGAA AATGCCAATT TGCCTCTGTT TATTTACAAT GTCCAAGATC AAGTAATTTA TATGCGAACA CCAGGGGAAT AG
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Protein sequence | MVGYTVHLYS TNEHPSFSVL TDTENIIEDQ QEGSMRVAVQ QEDLQLLSRT LQEQFLAEVP SGEFFQIKCA VNKDELMILA QHPVSVKVDT QEIFAVLEEA LQSLPPYQDQ PVQCFLRIVG EKLPYAKRSL TMKGYRQVES PDIPQDNEDQ EDEDAASFSS LALPLSYSTT TDAVEDEEEV FDPLAGTPDL LTNSSQRPLK KILLGTVVGI SLLGSGGVYL VTRPCVMSVC QEFQTAQQLN TQFRQLISRA RSEKDLTTLQ QQLETTSTAL GVIPAWSSYY QQAAELKTNL SGRSEKISQV NKALQAASVA EQKMQTPATS QGELQARQQL WRQAITPLEA ISPNHELYGL IQPKLLKYRI HLQTINQQLL AQEKWVKKLA DAKGVASVAN KWETTAKSLK DWQKVQSTWQ VVINALNVIP PSSPASQEAQ QLLLEYKPKL ARARDRVTIE QLAAKSYQQI LVIASQAKAY EQKQEWQAAV IYWQQALQAA KQISNNSLYY TQAQSLITPY SASLQQAQEK LILNNSWQQT RADLNKTCSS EIRICNFTVD DKGIIVKITP EYEQVLQSTV SKNNTQDSEA AIGVANHWQT LQEALTVISE NANLPLFIYN VQDQVIYMRT PGE
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