Gene Ava_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1782 
Symbol 
ID3682066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2222788 
End bp2224659 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content41% 
IMG OID637717122 
Producthypothetical protein 
Protein accessionYP_322299 
Protein GI75908003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.188313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.661033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGTT ACACTGTGCA TCTGTATTCA ACAAACGAAC ACCCTTCTTT TTCGGTTCTC 
ACCGATACAG AAAATATTAT AGAAGACCAG CAGGAAGGCT CTATGAGAGT AGCAGTCCAG
CAGGAAGATT TACAGCTATT AAGCAGAACT TTGCAAGAAC AATTTCTTGC CGAAGTTCCC
TCTGGTGAAT TTTTCCAGAT TAAGTGTGCA GTCAACAAAG ATGAGTTAAT GATCCTAGCT
CAACATCCAG TTAGCGTAAA AGTTGATACA CAAGAAATTT TTGCAGTACT TGAGGAAGCA
CTGCAATCAT TACCACCTTA TCAGGATCAG CCAGTCCAAT GTTTTCTGAG AATTGTCGGG
GAAAAACTTC CTTACGCTAA ACGTTCCCTG ACTATGAAGG GATACCGACA GGTGGAAAGC
CCTGACATTC CACAAGATAA TGAAGATCAA GAAGACGAGG ATGCAGCATC TTTTTCATCC
TTAGCATTAC CTTTGAGTTA TTCAACCACA ACAGATGCCG TCGAAGACGA AGAAGAAGTA
TTTGACCCCC TAGCTGGTAC ACCAGATTTA TTAACAAACT CGTCTCAGCG TCCATTGAAA
AAGATTTTGT TAGGGACTGT GGTGGGAATT TCTCTCTTAG GTAGTGGTGG TGTTTACCTA
GTGACTCGTC CTTGTGTGAT GTCTGTGTGT CAAGAATTCC AAACTGCCCA GCAACTCAAT
ACTCAATTTC GCCAATTGAT TAGTCGTGCT AGGTCAGAAA AGGACTTGAC AACATTACAA
CAACAGTTAG AAACAACTAG CACCGCCTTA GGTGTAATTC CTGCTTGGTC ATCTTATTAC
CAACAAGCAG CAGAACTCAA AACTAATCTG TCTGGACGTT CCGAAAAAAT TAGCCAAGTC
AACAAAGCTT TGCAGGCGGC TTCAGTTGCA GAGCAAAAAA TGCAAACTCC TGCTACTAGT
CAAGGCGAAT TACAAGCTAG ACAACAACTT TGGCGACAAG CGATAACGCC CCTGGAAGCA
ATCAGCCCTA ATCATGAACT ATATGGACTG ATACAGCCAA AATTGTTGAA ATATCGGATT
CATTTGCAAA CTATCAATCA GCAATTACTC GCTCAAGAAA AGTGGGTGAA AAAGTTAGCA
GATGCGAAAG GCGTGGCTAG TGTAGCCAAC AAGTGGGAAA CAACAGCCAA ATCTTTGAAA
GATTGGCAAA AGGTGCAGTC TACTTGGCAA GTAGTAATTA ATGCCTTGAA TGTTATACCT
CCTTCGAGTC CAGCATCTCA AGAGGCACAA CAACTATTAC TAGAATATAA ACCTAAACTT
GCAAGAGCGC GCGATCGCGT TACCATCGAA CAACTAGCAG CTAAAAGCTA CCAACAAATT
CTTGTTATAG CCAGCCAAGC TAAAGCTTAT GAGCAAAAAC AAGAATGGCA AGCAGCTGTT
ATTTACTGGC AACAAGCTTT ACAGGCAGCT AAACAAATTT CTAACAATAG CTTGTATTAC
ACTCAAGCTC AGAGTTTAAT CACACCATAT TCAGCTTCCC TGCAACAGGC GCAAGAAAAA
CTAATTTTAA ATAATAGTTG GCAGCAAACC CGTGCTGACT TAAATAAAAC TTGCTCTAGT
GAAATTAGGA TTTGTAACTT TACCGTAGAC GATAAAGGAA TCATCGTCAA AATTACCCCT
GAATATGAAC AGGTACTACA AAGTACTGTT TCCAAGAACA ACACTCAAGA TTCTGAGGCT
GCAATTGGCG TTGCTAATCA TTGGCAAACC TTACAAGAAG CTTTAACAGT AATTAGCGAA
AATGCCAATT TGCCTCTGTT TATTTACAAT GTCCAAGATC AAGTAATTTA TATGCGAACA
CCAGGGGAAT AG
 
Protein sequence
MVGYTVHLYS TNEHPSFSVL TDTENIIEDQ QEGSMRVAVQ QEDLQLLSRT LQEQFLAEVP 
SGEFFQIKCA VNKDELMILA QHPVSVKVDT QEIFAVLEEA LQSLPPYQDQ PVQCFLRIVG
EKLPYAKRSL TMKGYRQVES PDIPQDNEDQ EDEDAASFSS LALPLSYSTT TDAVEDEEEV
FDPLAGTPDL LTNSSQRPLK KILLGTVVGI SLLGSGGVYL VTRPCVMSVC QEFQTAQQLN
TQFRQLISRA RSEKDLTTLQ QQLETTSTAL GVIPAWSSYY QQAAELKTNL SGRSEKISQV
NKALQAASVA EQKMQTPATS QGELQARQQL WRQAITPLEA ISPNHELYGL IQPKLLKYRI
HLQTINQQLL AQEKWVKKLA DAKGVASVAN KWETTAKSLK DWQKVQSTWQ VVINALNVIP
PSSPASQEAQ QLLLEYKPKL ARARDRVTIE QLAAKSYQQI LVIASQAKAY EQKQEWQAAV
IYWQQALQAA KQISNNSLYY TQAQSLITPY SASLQQAQEK LILNNSWQQT RADLNKTCSS
EIRICNFTVD DKGIIVKITP EYEQVLQSTV SKNNTQDSEA AIGVANHWQT LQEALTVISE
NANLPLFIYN VQDQVIYMRT PGE