Gene Ava_1764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1764 
Symbol 
ID3682107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2197527 
End bp2198450 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content38% 
IMG OID637717104 
Productperiplasmic binding protein 
Protein accessionYP_322281 
Protein GI75907985 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGTC GCTGGATATT ATCTACTTTT GCAATTTTAT TGAGCATAAT TTTAACTGCG 
TGTAATACTA CAAATACTCG GCAGCCACAA GCACAAGCTA CGCAAAGTAT TACAACAACT
AATACTCCAT CTCAAGAATT AGCAAAATTA TCCGCCAAAA GAGTTGTTAC ACTCTCTTCT
CTAACCACAG ATATCATTTT TCAACTGGAT AAAACAAAGC TTGTAGGTAT TGCTGGTAGT
TCATTATTTA AAAATGACCC CCGTTTCCAA GATATACCTC GTATCAGCGA AGGTCAAAGT
CCTCCCAATT TGGAAAAAAT TGTGGCACTT AAGCCTGATT TAGTTATTGG TGCAGAAGGT
TTTTCTAATC AGCCAATTCA AAGACTCCAA CAATTAGGTA TTCCCACCTT ACTTACTCAA
GTAAATACAT GGAAGTCGTT GGAAGAGATT ACAGCAAAAC TGGCTCAGTT AATTGATGTT
AATCCCCAAC CTTTGTTAGA ACGTTATCAA AGTTTTCTAG CGGATAGGCC AGGAACAAAT
ACCCCTATTT TAGTTCTGGT TAGTAGTCAA CCAATTTTAG CTCCAAATAA GAATAGTTGG
GCTGGGGATT TACTAGAAAA ATTCCAAGTA AAAAATTTAG CAGCAGAACT GCAAGGAAAA
AGCCCAATTG CTGGTTATGT AACTCTTTCG GCTGAGAAAG TTTTAGAAGC TAATCCAGAA
GCGGTTGTTC TGATTACCCC TCCTCAAGGT GGTTCAAAAA CAGAAGTTTT AGCTTCCTTC
AAAAAAGAGA GTTTTTGGCA AAAACTACCC GCGACTAAGA ATAATCGAGT CTATGTTTTT
GACTATTATG GGTTGGTGAA TCCGGGTAGT ATAGATGCGA TAAAGCAGGC TTGTGAGCAG
ATTAAAAAAG ATTTGTTGGG GTAA
 
Protein sequence
MLRRWILSTF AILLSIILTA CNTTNTRQPQ AQATQSITTT NTPSQELAKL SAKRVVTLSS 
LTTDIIFQLD KTKLVGIAGS SLFKNDPRFQ DIPRISEGQS PPNLEKIVAL KPDLVIGAEG
FSNQPIQRLQ QLGIPTLLTQ VNTWKSLEEI TAKLAQLIDV NPQPLLERYQ SFLADRPGTN
TPILVLVSSQ PILAPNKNSW AGDLLEKFQV KNLAAELQGK SPIAGYVTLS AEKVLEANPE
AVVLITPPQG GSKTEVLASF KKESFWQKLP ATKNNRVYVF DYYGLVNPGS IDAIKQACEQ
IKKDLLG