Gene Ava_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1750 
Symbol 
ID3682132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2184353 
End bp2185072 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID637717090 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_322267 
Protein GI75907971 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.499959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCTC CATCCTCCTT TTCTGAGGCA TCACGCCCTT TTTTGACTTG GCAACGCATT 
CTTGACTGGG CTCAAGAACA CTATCGCTGC CGTACCTTTA GCAAAGATGA GCGCATTCCA
GCAAGACCTG GGTTGCTTTA TTTAGTGCAG AGAGGTGCGA TCCGCATGGT AGGAACCGCC
CAGGTTAGTG CTACTGCAAG TCAATTGACT TCTCGACGGA TCAACAGAAC CCCAGAAGAA
GCTTTCTTGG GATTTGTGGG CGCGGGACAG CCGTTTGAAA TTGTGGCTCA GTCTCCATTC
ACACTCCAGT CCTACGCTCA CGTTGATCAA ACCGCCGTAC TGTGGATGTA TTGGCACGAT
CTAGACAACT GGCCTCACTT CCGTCGTGAA GTGATGGATG CTTTCAGATA CCAACACCAG
CGTAAGTTGC TGTGGCTTAG TGCCTTGGGA CAACGGCGTA CAATTGACAG ACTCTTAGGA
TTCCTCACCC TACTGATTGA GGAATATGGA GAACCAGCCA TGAGCGAAAC TGATCCCGAT
GTCATTCGTG GTTATTGTCT GCCTTTCCCC CTTACCCATG CTCAAATTGG TAGTGCCATT
GGTTCAACTC GTGTAACCGT GACTCGTTTA ATGGGTAAGT TACGTCAGCG TGGCTTAATC
CTTACTCAAG GGGATAACTT GATTTGTTTG CCAGCAGAGT CAATCAACAG AGCTAGCTAA
 
Protein sequence
MQSPSSFSEA SRPFLTWQRI LDWAQEHYRC RTFSKDERIP ARPGLLYLVQ RGAIRMVGTA 
QVSATASQLT SRRINRTPEE AFLGFVGAGQ PFEIVAQSPF TLQSYAHVDQ TAVLWMYWHD
LDNWPHFRRE VMDAFRYQHQ RKLLWLSALG QRRTIDRLLG FLTLLIEEYG EPAMSETDPD
VIRGYCLPFP LTHAQIGSAI GSTRVTVTRL MGKLRQRGLI LTQGDNLICL PAESINRAS