Gene Ava_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1582 
Symbol 
ID3678708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1953910 
End bp1954272 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content43% 
IMG OID637716922 
ProductArsR family transcriptional regulator 
Protein accessionYP_322100 
Protein GI75907804 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00023069 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAA CAAAGCCATC CCAGGCTGAT CCGTCTGTTC TTGTGGCGGT TGCTGACTAT 
TTTAAGGTAC TATCGGAGTC CAGTCGATTA CAGATTTTGT CTTGTCTCAA GTCAGGGCCG
ATGAATGTCA TGGAAATTGC GGAGGCGACT GGCTTAGGAC AGGCAAATTT GTCTAAGCAT
TTGAAAGTTT TAACTCAAGC AGGTCTGGTA TCTCGTCAGC CTAAGGGTAC TAGCGCTTAC
TACGAGATTA CTGATCCAAT GATATTTGAA CTTTGTGAGT TAGTATGCGA TCGCATTAGT
CAACGTTTAA TACAGCAGGC TAAGAGTCTG AAAGCCCTTC AAGAGAAAAC ACCGATTTTT
TAA
 
Protein sequence
MPKTKPSQAD PSVLVAVADY FKVLSESSRL QILSCLKSGP MNVMEIAEAT GLGQANLSKH 
LKVLTQAGLV SRQPKGTSAY YEITDPMIFE LCELVCDRIS QRLIQQAKSL KALQEKTPIF