Gene Ava_1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1522 
Symbol 
ID3682293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1871664 
End bp1872677 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content43% 
IMG OID637716862 
Producthypothetical protein 
Protein accessionYP_322040 
Protein GI75907744 
COG category[R] General function prediction only 
COG ID[COG4671] Predicted glycosyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00720586 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.955274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGACTA ACCAACAATT GACTAAAACT TGGCTAATTT ACGCCTTGGG TGGCGGTTGG 
GGACATTTGA CTCGTGCTTT GTCTTTGGGA AGAATTGCGG CAAAGCAACG AAACGTCAAA
ATTATTACAA ATAGTCCCTA TGTACAACAA ATCAATCATG AAGGCTGCAC ACTGCATTGG
ATTCCCGATA GTGTAAGTTT TGCTGCAACT TGTCAACAAA TAAGGGAAAT TATCCTCAAT
ACTAACCTTG ACTGCTTAAT TATCGACACA TTTCCCAGAG GCTTGGGTGG AGAACTAGCC
GACATTCTAC CCCAGTTGCA CACCACACCC AGGATTCTGA TTCATCGAGA TATAAATCCT
CATTATGTAG CTACCAAAAA CTTGCGATCG TTTGTCTTAG AGAACTTTCA GAGGGTAATT
ATACCTGGAG ATGGCACAGA TATAGCCTTT TCCGACTTAC CAGGAGTAAT GCACACAGCA
CCTTGGTTAA TTCGTAACCC AGAAGAATTA CCCGATAAGA TGATAGTGCG ATCGCATATC
CTCAAAACCA ACCCATCCCA TAAAACTATC CTAGTTTGTG CAGCCGGACA AGCATCAGAA
CTATCTTTAT TTGGTGAAAT TACACTGCAT CTACATCACA ATTTTCCCGA ATGTGCTGTC
AGAATTTTAG CTCCTCATTG CCCCCATAAC TGCCCAGAAA GCTTGTGGAT ATCCCATCAT
CCTGGCATTG AGTGTCTAGC GGCGGCTGAT ATAGTCATCG GCAGTGGGGG ATATAACACG
GTTTACGAAT GTGCTGCCGT AGGTGTACCG TTGGTAGCGT TAGCCTTACC ACGATTGTAT
GATCGCCAAC AAAAAAGAGC TAGCAAAGGT TACTGGGTGC AGAATATCGA AGATGCCATT
GTGACAGTGA GATTGATCCT ACAGCAATTA AAACTAGGAA AGCCATCACC TATACCAACA
TATACCAATG GTGCAATTGC CGCCATGCGC CACATCATGA AATATGAGTT ATAA
 
Protein sequence
MTTNQQLTKT WLIYALGGGW GHLTRALSLG RIAAKQRNVK IITNSPYVQQ INHEGCTLHW 
IPDSVSFAAT CQQIREIILN TNLDCLIIDT FPRGLGGELA DILPQLHTTP RILIHRDINP
HYVATKNLRS FVLENFQRVI IPGDGTDIAF SDLPGVMHTA PWLIRNPEEL PDKMIVRSHI
LKTNPSHKTI LVCAAGQASE LSLFGEITLH LHHNFPECAV RILAPHCPHN CPESLWISHH
PGIECLAAAD IVIGSGGYNT VYECAAVGVP LVALALPRLY DRQQKRASKG YWVQNIEDAI
VTVRLILQQL KLGKPSPIPT YTNGAIAAMR HIMKYEL