| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1516 |
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| Symbol | rplU |
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| ID | 3682482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1864406 |
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| End bp | 1864798 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637716856 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_322034 |
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| Protein GI | 75907738 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00385929 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTACG CGATTATTGA GACTGGTGGC AAGCAAGTGC GAGTTGAGCC AGGTCGTTTT
TACGATATTG AACTCCTCTC TGCCGAACCA GATGAAAAAG TTACAATAGA GTCTGTATTA
CTAGTGCAGA ATGACGGTGA AGTCACCATT GGACAACCGT TAGTAGCTGG GGCAACAGTG
CAAGGAACGG TGTTGCGGCA TCTTAGAGGT CGCAAAGTCC TGGTTTATAA AATGAAGCCG
AAAAAGAAAA CCCGCAAAAA ACGGGGGCAT CGCCAGGAAA TCACCAGACT TTTAATAGAT
TCCATCACTT TTAACGGCAC AGTCTTAACA GCACCTACTG CAAGTGCGGA AACTGCTGAT
GCTACCCCAG ATACAGAAAC TGCTGCTGAA TAA
|
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| Protein sequence | MAYAIIETGG KQVRVEPGRF YDIELLSAEP DEKVTIESVL LVQNDGEVTI GQPLVAGATV
QGTVLRHLRG RKVLVYKMKP KKKTRKKRGH RQEITRLLID SITFNGTVLT APTASAETAD
ATPDTETAAE
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