| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1431 |
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| Symbol | |
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| ID | 3682571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1770482 |
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| End bp | 1771567 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637716769 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_321949 |
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| Protein GI | 75907653 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR02971] ABC exporter membrane fusion protein, DevB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.817689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCATT TTTTTATTTC AATTAGCAAC AGGAAATCTA CTTACATTCT AGTTATTTTT
GCAACTATGA GCTTGGGTGC GATCGCGTCC GGCAGGGTAA TTATCTCACC GATACTGGGG
AGTAATGAAG CAGTAACACC TCAGCCAGTA GTTGCAACTC CAGTAGTACA AGGAGTAACT
GCTTTGGGAC GTATAGAACC GGAAGGAGAA GTCAGGCAAG TGTTTCCGGC TTCTACAACA
GAATCGGCTC GTATCCAAAG ACTACTGGTG AAGCACGGGG ACAAGGTAAA GGCGGGGCAA
GTGCTGGCAG TGTTAGATAA TTATGCCCGT CGTTTAGCAA CTGTGAAAAT GGCAGAGGAA
GAAGTGCAGG TGGCTCAAGC CCGCTTAATG CAAGTCAACG CAGGAGCAAA ACAGGGAGAT
TTACAAGCTC AACAAGCAGA GATCGCTCGA TTAGAAGCAG AACTGCACAA TGCCAAAATC
GAGGAATCAC GATATCGCAT TTTGTATAAA GAAGGAGCGG TTTCAGCTTC GCAGTACGAT
AGCAAACGCC TACAGATGGA AGCTGCACAA CGATATATGA CTCAAGCCTA TGCTGCGTTG
AAGAGTTTGG CAGAAGTACG CACAGTGGAT GTGCAGTTGT CCCAGGCAGA GGTGAAACAG
GCAAAAGCTA AGGTGGTGCA GGCTCTGGCA GAACTGGACT TGAGTATAGT GCGATCGCCA
CAAAATGGAC AAATATTGAA AGTGCAAGCT TTTCCCGGTG AATTGGTGGG AACTCAAGGC
ATCGTGAGTT TAGGTAATAC AACGCAAATG GTAGTGATAG CAGAAGTTTA CGAAACGGAT
ATCCGCAAAA TACATCTAGG GCAAACAGCA ACAATTACCA GTCCTAGCCT CACCAAACCG
CTCTCTGGAA AAGTCTCTCA AGTAGGATTA GAAATTGGTA CTCGGAATGT ATTAGATACA
GATTCCCCAA CAAATGTAGA TACTCGTGTA GTAGAAGTAA AAATTCTTTT GCATCAAGAA
AGTAGTCATC GTGTAGCAGG AATGACGAAT CTCAAAGTTG ATGTATCCAT AGACATGGAA
CATTAA
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| Protein sequence | MTHFFISISN RKSTYILVIF ATMSLGAIAS GRVIISPILG SNEAVTPQPV VATPVVQGVT
ALGRIEPEGE VRQVFPASTT ESARIQRLLV KHGDKVKAGQ VLAVLDNYAR RLATVKMAEE
EVQVAQARLM QVNAGAKQGD LQAQQAEIAR LEAELHNAKI EESRYRILYK EGAVSASQYD
SKRLQMEAAQ RYMTQAYAAL KSLAEVRTVD VQLSQAEVKQ AKAKVVQALA ELDLSIVRSP
QNGQILKVQA FPGELVGTQG IVSLGNTTQM VVIAEVYETD IRKIHLGQTA TITSPSLTKP
LSGKVSQVGL EIGTRNVLDT DSPTNVDTRV VEVKILLHQE SSHRVAGMTN LKVDVSIDME
H
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