Gene Ava_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1399 
Symbol 
ID3682693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1728291 
End bp1729754 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content47% 
IMG OID637716736 
Producthypothetical protein 
Protein accessionYP_321917 
Protein GI75907621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.283168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA CGGTAGAAAT CGAACGTCAT CGAGCCGCGA TCGCTCGGAC TGAAATCTCT 
CGTCCTGTAC GATTGGCTAT AGAATGGGCA ATCCTCAACC CAGACACGGT TTTTTTTGAC
TACGGCTGTG GTTATGGTGG TGATGTGCAA CGTGTAGCTA ATCTTGGCTA CACCAGTACA
GGTTGGGACC CTTACTACTA CCCTGATGCA GCCATTAACC CCGCCGATGT GGTGAATTTG
GGTTACGTCC TCAACGTCAT CGAAGACCAA GAAGAACGCC GCCAAAGCCT CATTCAAGCC
TGGGAACTCA CCCGCAGAGT TTTAATTGTC GCGGCGCAAG TATTAATTAA CGCCCCTAGT
AAAGCCCAAC TGGCTTACAG TGACGGTATT GTCACCAGCC GGAATACTTT CCAAAAATAT
TACGAACAAC AAGAACTGAA AAAATATATC GATGAAGTTT TAAACGTTGA TGCAGTACCA
GTCGCCCTTG GCGTTTATTT TGTCTTCCGC GATGAAGCCG AAAAAGAAAG CTTCAAAGCC
ATCCGTTTCT TTTCTCGCAC CTCTACACCG CGAGTCCGCA TTCCTGTCAA ACGGTTTGAA
GACTATCAAG AACAACTCGC GCCCCTCATG GCATTTTTCA CCAAACGGGG TAGACTGCCA
ATAAAAGGAG AACTAGCCAC CGCACAAGAA TTACTGAGCG AATTTGGCAA CTTCCGCCGG
GCTTTCGCAG TTGTCCTGCA AGCCACCGAT GAGGCAGAAT GGGATGCGAT CGCCTATCGT
CGTTCTTTAG ATATTCAAGT TTACCTTGCC CTCACCCACT TTGATCAACG TCCCAAATTC
TCCCAACTAG CGCCAGAAAT GCGCCACGAC ATCAAAGCTT TCTTTGGGAG CTACGAGGAA
GCCTGTAATA TCGCCGACCA AAAACTTTTT AGTTTAGGTA AACCAAAGGT AGTCCAAACA
GCTTGCGAAA AAAGCAAAGT AGGTAAGCAC ACACGGGGTG CTTTATACGT CCACGTTTCT
GCATTGGCAG CCCTCGACCC GTTGCTACGA ATTTACGAAG GTTGTGCAAG CCGTACCATT
GGGCGTGTCG ATGGAGCTAC GCTCATCAAA TATTACACCG ACCAACCGCA AATATCCTAT
TTGTTCTATC CAGAATTCGA CATAGACCCC CACCCGTCCT TAAAAGCCAG TATCACAATT
GACTTAAAAA CACTGTATGT AACTCACCGC GACTATAGCA CCAGAGCCAA TCCACCCGTC
CTGCACCGTA AAGAAACTTT TGTTACTCCC AACTATCCCT TGTATGAACA ATTTGCTAAA
CTCACCCAAC AAGAACAGAA GTTAGGATTG CTCAAGCAGA AAAGTGAAAT TGGCACTCGT
GAAGGTTGGG AAAAATGCCT CGCTGCTCAC GGTGTAGAAA TTAGGGGACA TGAAATTCAT
GTGATTAGAG AAATCACACA GTAA
 
Protein sequence
MAETVEIERH RAAIARTEIS RPVRLAIEWA ILNPDTVFFD YGCGYGGDVQ RVANLGYTST 
GWDPYYYPDA AINPADVVNL GYVLNVIEDQ EERRQSLIQA WELTRRVLIV AAQVLINAPS
KAQLAYSDGI VTSRNTFQKY YEQQELKKYI DEVLNVDAVP VALGVYFVFR DEAEKESFKA
IRFFSRTSTP RVRIPVKRFE DYQEQLAPLM AFFTKRGRLP IKGELATAQE LLSEFGNFRR
AFAVVLQATD EAEWDAIAYR RSLDIQVYLA LTHFDQRPKF SQLAPEMRHD IKAFFGSYEE
ACNIADQKLF SLGKPKVVQT ACEKSKVGKH TRGALYVHVS ALAALDPLLR IYEGCASRTI
GRVDGATLIK YYTDQPQISY LFYPEFDIDP HPSLKASITI DLKTLYVTHR DYSTRANPPV
LHRKETFVTP NYPLYEQFAK LTQQEQKLGL LKQKSEIGTR EGWEKCLAAH GVEIRGHEIH
VIREITQ