Gene Ava_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1372 
Symbol 
ID3682803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1692017 
End bp1692940 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content43% 
IMG OID637716710 
Product1-aminocyclopropane-1-carboxylate deaminase 
Protein accessionYP_321891 
Protein GI75907595 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2515] 1-aminocyclopropane-1-carboxylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0288734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTGA CCTTTGTTCC TCCCCCAATA CAAAAAATCA ATAGTGAGAT TGCTAATAAC 
GCTGGTGTAG AAATTGATGT ATTACGCCTT GATTTAATGC ACCCGTGGGT AAACGGTAAT
AAGTGGTACA AGCTAAAATA CAATCTCTTA GAAGCGAAAG AGAAAGGTTA TACAACATTA
CTTACCTTTG GTGGTGCATA TTCTAATCAC ATCTTTGCTA CAGCCGCCGC AGGTAATCTG
TTAGGTTTCC AGACTATTGG TGTGATTCGC GGGGAGGAAA CCTTACCCTT AAATCCCACA
CTAAGTTTTG CCACAAAACA AGGTATGCAG CTTGTCTATG TGGACAGGGA AACCTATCGA
CAACGAAACA GCGCCACATT ACACGCAGAC TTAAGGAAAC GCTTCGGTGA GGTATTTATC
ATTCCTGAAG GTGGTAGTAA TTTGAATGGT GTGCGCGGTT GTCTAGAAAT CATCAGTGCC
GCAACGCAAG CATTTAATAT TGTGTGTGTA GCTTGTGGTA CAGCCACTAC TCTAGCAGGT
ATCGCTCTGG CGCTGGAAGC AAAGCAACGT GTCATCGGTT TTCCTGTGTT AAAAAATGGG
GGTTTTCTAG CAGAGGAAAT TACTCAGTTT ATGAATAATT ATGTCGCGGC GGGGCTGCCC
ATTTCATCAA GTTCTCCCGC GCATTGGGAA TTAGTTTGCG ATTACCATTT TGGCGGTTAC
GCCAAGGTGA AAGATGATCT TATCGTGTTC AGTCAGCAGT TTACCCAAAC CCACGGCGTA
CCCCTTGATT ACGTGTATAC CGCGAAAATG TTTTATGGTG TGATGGACTT GTTAAAGCAA
AGATATTTTA CAAAAGGCGA TCGCATCTTG ATGATTCACA CCGGTGGCTT ACAAGGAAAT
ATCGGGATGA GTGAACGATT GTAA
 
Protein sequence
MSLTFVPPPI QKINSEIANN AGVEIDVLRL DLMHPWVNGN KWYKLKYNLL EAKEKGYTTL 
LTFGGAYSNH IFATAAAGNL LGFQTIGVIR GEETLPLNPT LSFATKQGMQ LVYVDRETYR
QRNSATLHAD LRKRFGEVFI IPEGGSNLNG VRGCLEIISA ATQAFNIVCV ACGTATTLAG
IALALEAKQR VIGFPVLKNG GFLAEEITQF MNNYVAAGLP ISSSSPAHWE LVCDYHFGGY
AKVKDDLIVF SQQFTQTHGV PLDYVYTAKM FYGVMDLLKQ RYFTKGDRIL MIHTGGLQGN
IGMSERL