Gene Ava_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1365 
Symbol 
ID3682874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1681262 
End bp1682449 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content37% 
IMG OID637716703 
Productglycosyl transferase, group 1 
Protein accessionYP_321884 
Protein GI75907588 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0364261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT TAGTTGCCAG TCACACTTAT ATTGTAGACC TCAACTGTCA AAAACTAAGA 
GCTTTATCTC AATTAGAACC GGGGATTGAA GTTACAGTTG TCGTTCCTAA AACTTGGAAA
CCCGGTGGTG TTCAAAATAA AATTATTGAA ACCCAGTACC GTGATGAAGG TGCTTTTAAG
ATAGTTCCGG TTTCTAACTT TAGTCAAAAT CATCAAGGGT TACTAACTTT TGGGGCTGAT
TTAGTATCTT TATTGCGTGA GTTTCGCCCC CAAGTAATTC AGGTAGAACA AGGTTCTAGG
GGTCTTGCAT ACGCTCAAAT GATTGCCTTG AATCAATTAT TAAATCTGAA GGCAAAAAAT
ATATTCTTTA CTTGGTGGAA TTTACCTTAC GAATTAAAAT TACCAATTGC TTTATTAGAG
AAATATAACC TTAATAATAG CCACGGTATT ATTTCTGGTA ATCAAGACGG CGCTGAGGTT
TTACGACAAC GGGGATATCA AGGGAAAATT AAAGTTATGC CCCAATTGGG TGTAGATGAA
ACTTTATTTA CACCTCAAGC ACAACCAGAA TTGGCGGCTA AGTTAGGCAT CAAATCTGAT
GAATTTGTGA TTGGCTTCGT GGGGCGATTT GTGCCAGAAA AGGGTTTGCT TACACTTTTG
CAAGCATTAA CTAAGTTACC TCTAGATAAA ACTTGGAAGT TACTATTATT AGGACGCGGC
CCCTTACAAG AAGAATTAAT TAAAATTGCA GCAGAAAATC ATATTCAAGA TAGGGTAATT
CTTATAGAAA GTGTCCCTCA TGATGAAGTC GCCAACTATA TCAATTTAAT GAGTACTCTG
GTACTGCCTT CAGAGACGAC TTATAACTTT AAAACCTTAA CTTCTGTGGG GTGGAAAGAA
CAATTTGGTC ATGTGTTAAT TGAGGCGATG GCTTGTCAAG TCCCCGTGAT TGGTTCTGAT
TCCGGCGAAA TACCCTATGT CATCGGTGAT GCTGGCTTAG TCTTTCCTGA AGGCGATGTT
CAAGCATTGG CGAATTGCTT ATTGCAACTT ATTGAACAAC CGAATTTCAC CAAAGAACTT
GGTGAACGGG GTTATCAAAA AGCGATGGTT AAATATACAA ATAAAGCTTT AGAGGCTATT
TATAAAGTAA ATCTAAAAGT GAGTATAAAA GTAAGCTTGG AGGTATAG
 
Protein sequence
MKILVASHTY IVDLNCQKLR ALSQLEPGIE VTVVVPKTWK PGGVQNKIIE TQYRDEGAFK 
IVPVSNFSQN HQGLLTFGAD LVSLLREFRP QVIQVEQGSR GLAYAQMIAL NQLLNLKAKN
IFFTWWNLPY ELKLPIALLE KYNLNNSHGI ISGNQDGAEV LRQRGYQGKI KVMPQLGVDE
TLFTPQAQPE LAAKLGIKSD EFVIGFVGRF VPEKGLLTLL QALTKLPLDK TWKLLLLGRG
PLQEELIKIA AENHIQDRVI LIESVPHDEV ANYINLMSTL VLPSETTYNF KTLTSVGWKE
QFGHVLIEAM ACQVPVIGSD SGEIPYVIGD AGLVFPEGDV QALANCLLQL IEQPNFTKEL
GERGYQKAMV KYTNKALEAI YKVNLKVSIK VSLEV